Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi667g00012 ATGGTAAGAGCCCCTTTCTATGACAAAAATGGAGTGAAGAAAGGAGCATGGAGTAGAGAAGAGGATGAGAGATGGTCCAAGATTGCTGAACATTTGCCTGGAAGAACGGACAACGAGGTAAAGAACTATTGGCATAGCAACCTAAAAAAGCGCTTAAAGAGCGATGGTGATTTGAACACAACATCTGAGTTGAAATCAAAGCCAATTGATGATAACGTTGAAGAAATTAATGAGACTCATCAGTCAATGACATCTGAAAGCCCAGGTTCCGATATTGGTGAAGACTTCCATCATGTTTTAGAAAGCTCACTGCCCATGTCCACAGAAACATCAGAAGGAAACATCAATTCCCCTACCTCTAGTGTTGCACAATCGACCATGATCTACTCCGTGTCAAAAGAAGATTGTGTGGCTGCTCCATGGACAGCATTCGAAGAATTCGGGGGCGATTTTTGGACTGAACCGTTCGTTGTAGAAGATACATATAATGAGATATGTAGTGGTGAAGACGTAGCCTTAATGATTCCAAACTTCTATGACGACACATATTTGTTGTAG 558 0.4158 MVRAPFYDKNGVKKGAWSREEDERWSKIAEHLPGRTDNEVKNYWHSNLKKRLKSDGDLNTTSELKSKPIDDNVEEINETHQSMTSESPGSDIGEDFHHVLESSLPMSTETSEGNINSPTSSVAQSTMIYSVSKEDCVAAPWTAFEEFGGDFWTEPFVVEDTYNEICSGEDVALMIPNFYDDTYLL 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi667g00012 185 Gene3D - 15 76 - -
Sebi667g00012 185 ProSiteProfiles Myb-like domain profile. 9 48 IPR001005 -
Sebi667g00012 185 Pfam Myb-like DNA-binding domain 23 47 IPR001005 -
Sebi667g00012 185 CDD SANT 16 48 IPR001005 -
Sebi667g00012 185 SMART sant 13 50 IPR001005 -
Sebi667g00012 185 SUPERFAMILY Homeodomain-like 5 54 IPR009057 -
Sebi667g00012 185 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 24 119 - -
Sebi667g00012 185 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 52 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi667g00012 Sebi-Chr667 413216 414987 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi667g00012 7 175 MYB Transcription Factor Family AT3G23250 29.891 2.13e-16 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi667g00012 Myb_DNA-binding 2.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi667g00012 K09422 - gmx:100782270 117.087