Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi667g00008 ATGGTGAGAGCTCCTTATTTTGATGAAAATGGAATAAAAAAAGGTGCATGGAGTGAGGAAGAGGATAAGAGACTTATAGCTTACATTGAGAAACATGGCCATCCTAATTGGCGTCAACTCCCAAAGTTTGCAGGTTTGGCTAGATGTGGAAAGAGTTGCAGGCTTCGTTGGATGAATTACCTACGACCCAATCTAAAACGTGGGAACTATACCCAAGAGGAAGAGCAAATAATCACGGAGTTGCATAAAAAGCATGGAAACAAATGGTCTCTGATTGCTGAAAATCTACCTGGCAGAACAGATAACGAGATAAAGAACTATTGGCACAGCAACCTAAAGAAGTTCTCACAGAGTAATGAGATCACAACATCTGATGATGAATTCAAGTCCTCCAAGTGTGCAGAATTTGAAAAGCCATCATCAAGCGAGGCTATTAGTGCTGATTCCCACCACATTTTGGAAAGTTCATTGTCCAACTCCATTTCCTCGGAAGTGTCCTACACTGAACACAATTCCCCTTCCTTTTCCTCTAATCATTCGGATTCAAACGTGAACTTGTCCAGAGAAGAAGAGAGAGTTGCTTCATGGGAAACATGGGATGGATTCAGCAGCAGTTTTTGGACTGAACCGTTTATTTCAGAAAACGCTTTTAGTCAGAATGATTACTTTCCCATTTCATGCTACGGAACAGAGGAAGAGGAACCATTTTTTATATGGTAG 720 0.4097 MVRAPYFDENGIKKGAWSEEEDKRLIAYIEKHGHPNWRQLPKFAGLARCGKSCRLRWMNYLRPNLKRGNYTQEEEQIITELHKKHGNKWSLIAENLPGRTDNEIKNYWHSNLKKFSQSNEITTSDDEFKSSKCAEFEKPSSSEAISADSHHILESSLSNSISSEVSYTEHNSPSFSSNHSDSNVNLSREEERVASWETWDGFSSSFWTEPFISENAFSQNDYFPISCYGTEEEEPFFIW 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi667g00008 239 CDD SANT 69 112 IPR001005 -
Sebi667g00008 239 Gene3D - 13 66 - -
Sebi667g00008 239 SMART sant 66 114 IPR001005 -
Sebi667g00008 239 SMART sant 13 63 IPR001005 -
Sebi667g00008 239 FunFam Transcription factor MYB14 isoform A 69 141 - -
Sebi667g00008 239 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Sebi667g00008 239 CDD SANT 16 61 IPR001005 -
Sebi667g00008 239 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Sebi667g00008 239 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Sebi667g00008 239 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Sebi667g00008 239 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Sebi667g00008 239 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Sebi667g00008 239 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 210 - -
Sebi667g00008 239 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Sebi667g00008 239 Gene3D - 69 139 - -
Sebi667g00008 239 FunFam MYB-related transcription factor 13 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi667g00008 Sebi-Chr667 368185 369438 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi667g00008 1 114 MYB Transcription Factor Family AT5G16770 69.298 1.00e-55 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sebi667g00008 Myb_DNA-binding 3.4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi667g00008 K09422 - gmx:100781032 363.229