Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi667g00001 ATGTCTTTTAACGACGGGGATACAACGGCGGTTCAAAGGGGACCGTCGTTGAAAATTAAGCGGGAGAAAGTTAATATTCCTGCTTTGAAATCCTTCATAACCATAGAAGGAGCTGGTGCAAATAAAACCATTGTTCAATGGAATGACATTGCTCAAACACCTGGACCAAGTGGGAAACCATTGGGAACCATTGGTTCAGCAACTTTTTCTGTGAATTCACTTTATTTCATTTCCAAGAACATAACATTCCAAAACACTACTCCTGTTCCTGCACCAAGAGCAATTGGAAAACAAGCAGTGGCATTTAGGATTTCAGCAGACACAGCAGCATTCCTTGGCTTGTTCTTAGTTTCCTTTTCCAACTTAGAGGATGTTGATAGGAACTGCAAGGCTCTAGTGCAAAAAGGCATTGTTCGTGTTGCAGATATAAAATTCCTTCTACCATACAGGGTAAAGTCTTTTTCTCATGTCATAGTGTCACAACTAAGAACAAATTAA 498 0.3996 MSFNDGDTTAVQRGPSLKIKREKVNIPALKSFITIEGAGANKTIVQWNDIAQTPGPSGKPLGTIGSATFSVNSLYFISKNITFQNTTPVPAPRAIGKQAVAFRISADTAAFLGLFLVSFSNLEDVDRNCKALVQKGIVRVADIKFLLPYRVKSFSHVIVSQLRTN 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi667g00001 165 Gene3D - 20 138 IPR012334 -
Sebi667g00001 165 SUPERFAMILY Pectin lyase-like 21 118 IPR011050 -
Sebi667g00001 165 Pfam Pectinesterase 21 112 IPR000070 GO:0030599|GO:0042545
Sebi667g00001 165 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 20 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi667g00001 Sebi-Chr667 25372 26207 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi667g00001 21 114 Carbohydrate Esterase AT5G47500 47.872 1.80e-22 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi667g00001 K01051 - tcc:18588499 157.918