Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi666g00010 ATGGGCAGGGCTCCTTGCTGCGACAAAGCAAACGTGAAGAAAGGTCCATGGTCTCCAGAAGAAGATGCTAAACTCAAGTCCTACATCGAACAACATGGCACCGGCGGTAACTGGATTGCTTTGCCACAAAAAATCGGACTAAAACGCTGTGGGAAGAGTTGTCGTCTTAGGTGGCTAAATTATCTCCGCCCTAATCTCAAACACGGTGGTTTCTCTGAAGAAGAAGACAACATTATTTGCAGCCTTTACGTTAGTATTGGAAGCAGGTGGTCGGTGATTGCAGCTCAATTGCCAGGAAGAACGGATAATGACATAAAGAACTACTGGAACACAAGGCTGAAAAAGAAGCTTCTTGGGAAGCACCGTAATAATAAAGAACAACGTAATAGAGGTAATAATAAGCAAGAAAGGGATAATAGAGGGAGCTTTGGCGGTGAATATTCCTTATCTTTGGTTCCGGAAAATGGTAGTACTACTACTCAACAACAGCCATATTGGCCACATGTATCTGTTTTATCATCATCACTATCACTACCACCGTTGCCATATACAAACCAGCAAGGTCCTTCTTTCAATGACCAGGATTCTATTAAGAAACTGCTTATGAAGCTTGGAGGGAGATTTTCCGATGACTATCATCCCACCGTTAATAATAGTCTTCAATTCTCAGATGGGACCCACTCCTCCTCCACGGAACAGATTTATCATGTGGGCTCTTCTTCTAACAATGAAGTACAATTTGGTCAATACTGTGGAGAGGGACTTGCCCTGGTGCAAGGACAAGGAAGTTGCTTCAACTCATCATCAGCAATTGAGGAAATGGTGGTATCTTCTACTTATGCAGAGAGATATGATGGGTTGGAGTTTCTCTATGGAGAGGACTTGATTGAAGGTAAGATAATAGGATCTACTACTACTACTTGTGGCCAAAATGCTAGTAACTGGGGTGAAATTACTAGTACTCAGATTTATCATCCTCTTGCTTCCAATTATCAAGGTTGA 1002 0.4232 MGRAPCCDKANVKKGPWSPEEDAKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNLKHGGFSEEEDNIICSLYVSIGSRWSVIAAQLPGRTDNDIKNYWNTRLKKKLLGKHRNNKEQRNRGNNKQERDNRGSFGGEYSLSLVPENGSTTTQQQPYWPHVSVLSSSLSLPPLPYTNQQGPSFNDQDSIKKLLMKLGGRFSDDYHPTVNNSLQFSDGTHSSSTEQIYHVGSSSNNEVQFGQYCGEGLALVQGQGSCFNSSSAIEEMVVSSTYAERYDGLEFLYGEDLIEGKIIGSTTTTCGQNASNWGEITSTQIYHPLASNYQG 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi666g00010 333 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Sebi666g00010 333 CDD SANT 71 113 IPR001005 -
Sebi666g00010 333 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Sebi666g00010 333 MobiDBLite consensus disorder prediction 117 162 - -
Sebi666g00010 333 PANTHER OS09G0431300 PROTEIN 1 267 - -
Sebi666g00010 333 FunFam Transcription factor MYB36 70 140 - -
Sebi666g00010 333 SMART sant 13 64 IPR001005 -
Sebi666g00010 333 SMART sant 67 115 IPR001005 -
Sebi666g00010 333 Gene3D - 7 68 - -
Sebi666g00010 333 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Sebi666g00010 333 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Sebi666g00010 333 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Sebi666g00010 333 CDD SANT 16 62 IPR001005 -
Sebi666g00010 333 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Sebi666g00010 333 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Sebi666g00010 333 MobiDBLite consensus disorder prediction 124 141 - -
Sebi666g00010 333 FunFam Transcription factor RAX3 7 68 - -
Sebi666g00010 333 Gene3D - 70 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi666g00010 Sebi-Chr666 361506 362957 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi666g00010 1 210 MYB Transcription Factor Family AT3G49690 61.611 2.85e-83 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sebi666g00010 Myb_DNA-binding 2.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi666g00010 K09422 - gmx:100800290 424.476