Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi665g00026 ATGGGTATTTGGGATTACAAATTCTTACTTGGGGTTTCCTCTATCTTCTGGTTGGTATGGGTTTCATCTGGGGAGGTTCCTGATGACAACATTCTAATAGATTGTGGATCCCCCAACAATACTCAGGTGGGGGATCGCTTATTTCAATCTGATAATTCTTCTTCCCACTTGCTTTCAACCTCAGAGTTTATTTTGGCAAAGGCAAACTTCACCCCAATTCCATCATCTTTTGATTCAGACCTGTACCAGACTGCTCTAATCCTTAAAAGTGTTTCTCAATACACATTCCGAATCAAAAAACATGGAAGGCACTGGATTCGCTTGTATTTCTTCCCTTTCAGTTTTGGAAATTATAATATGAGCACTGCAAAATTCTCTGTTTCTGCTCAAAGCTTCACACTGCTCAAAGACTCTCAAATAGACAGTGGTTCTTCACTGAAAGAATACTCTTTGAACATAACTGATAGCCAGCTGAAGTTTTTATCCATCCCTGACAAGGTCATTCCTGAGCATGTTAGCAGTATGAGCCTACATGGGGTTGAAAAGGTTCTGTGGATGAAGGCATTGGAGACTGTTGCCAGGGTGAACATGGAAGAAGAGGAAACAGTCCTTCACACTGGTTTTGCTATTAGCAAAGAGGCTAGTAACAATTATGATGGAGCTGCGATTTTTTCAAGGTCAAAAATTGGGTATCGGTTGCCTCTTACAGTAATTCAAGAGCAACTAATATTTTCAGTGAGGATTGGTCACTGGTGCTGGTGGTTTGGGAAGGTTTACAAGGGAGTTTTGAAAGATGAAACAAAGGAGCAGCCAGAGGACTACATTATCTTCACAACCGGCTCTGCCAAGGCAATTATTCACCGTGATGTTAAATCGGCAAATATCCTGCTAGATGAAAACTTGACGGCTAAAGTTGCTGATTTTGGTCTTTCAAAGACTGGTCCAGAGATTGATAAGAGACATGTCAGTACAGCAGTGAAAGGAAGCTTTGGCTATCTTGATCCAGAATACTTAATAATGCAGCAGCTGACAGAAAAATCAGATGTTTACTCTTTTGGGGTGGAAAGAGGCACAATAGAGGAAATTGTAGATCATCTCCTTGCAGTTGCAGGTCAGATAAAGTCAGAGTCACTTCAGATATTCCTAGAGATTGCCACAAGTGCTTGGCAGAACATGGCATCACCAAGGCCTAGCATGGGAGAGGTGTTGTGGCACCTGGAATGTGCTTTGCGACTAGAAGGTGTTGATGAGAGATCCAATCATCGTGGTGGTGTTGCGTCCTCCCAAATGTATCGCTCAGAGACTGGATTATCTTCAATAGAATACAGTATGGGAAGCGTAGATGACCTATCTGGTGTTTCAATGAGCAAGGTGTTTGCCCAAATGGTGACAGAGGATAAGCAGTAG 1407 0.4222 MGIWDYKFLLGVSSIFWLVWVSSGEVPDDNILIDCGSPNNTQVGDRLFQSDNSSSHLLSTSEFILAKANFTPIPSSFDSDLYQTALILKSVSQYTFRIKKHGRHWIRLYFFPFSFGNYNMSTAKFSVSAQSFTLLKDSQIDSGSSLKEYSLNITDSQLKFLSIPDKVIPEHVSSMSLHGVEKVLWMKALETVARVNMEEEETVLHTGFAISKEASNNYDGAAIFSRSKIGYRLPLTVIQEQLIFSVRIGHWCWWFGKVYKGVLKDETKEQPEDYIIFTTGSAKAIIHRDVKSANILLDENLTAKVADFGLSKTGPEIDKRHVSTAVKGSFGYLDPEYLIMQQLTEKSDVYSFGVERGTIEEIVDHLLAVAGQIKSESLQIFLEIATSAWQNMASPRPSMGEVLWHLECALRLEGVDERSNHRGGVASSQMYRSETGLSSIEYSMGSVDDLSGVSMSKVFAQMVTEDKQ 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi665g00026 468 SMART serkin_6 197 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi665g00026 468 Gene3D Transferase(Phosphotransferase) domain 1 277 425 - -
Sebi665g00026 468 Pfam Protein tyrosine and serine/threonine kinase 282 354 IPR001245 GO:0004672|GO:0006468
Sebi665g00026 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 285 297 IPR008271 GO:0004672|GO:0006468
Sebi665g00026 468 ProSiteProfiles Protein kinase domain profile. 109 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi665g00026 468 Gene3D - 30 178 - -
Sebi665g00026 468 Pfam Malectin domain 32 140 IPR021720 -
Sebi665g00026 468 PANTHER OS07G0166700 PROTEIN 355 413 IPR045272 GO:0004714|GO:0006468
Sebi665g00026 468 SUPERFAMILY Protein kinase-like (PK-like) 283 413 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi665g00026 Sebi-Chr665 485299 487744 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi665g00026 279 468 Receptor kinase-like Gene Family AT2G39360 47.059 1.32e-53 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Sebi665g00026 Malectin 2.8e-05 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi665g00026 - - lja:Lj3g3v3639940.1 267.7