Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi665g00020 ATGGATAAGATCAATTTTGTGAAGAATGGGGAGCTTAGATTGCCTCCTGGATTCCGTTTCCACCCAACTGATGAGGAGCTTGTTGTTCAATACTTGAAGCGTAAGGCCTTCTCTTGCCCTCTCCCTGCCTCTATCATTCCTGAGGTTGATGTTTGCAAGTTGGATCCTTGGGATTTGCCAGGTGATTTGGAGCAAGAGAGGTACTTTTTCAGCACCAAAGAGGCCAAATATCCTAATGGGAATCGATCCAACAGAGCAACCAATTCAGGTTACTGGAAGGCAACTGGGTTGGACAAACAAATTGTAACTTCCAAAGGGAACCATGTTGTGGGGATGAAGAAGACTCTGGTTTTCTACAGAGGAAAGCCACCTCATGGATCAAGAACTGATTGGATCATGCACGAATATCGCCTCCACAACACTTCCTCTCAGACTCAGGTTGTGCAGAAGCAGAGCCATATGGAAAATTGGGTTCTATGTCGCATATTTTTGAAGAGGAGAGGCAGTGCTAAAAGTGGGGGTGAAGGCATAGAAAGCATAGATAACATTAGCCACAACAAGGTGAGAAACTCTAGGGTGGTTTTCTATGACTTCTTGGCACAGAACAAGACTTCTTCCTCATCCAGTGGCAGTGGAATCACAGAGCTTTCCACCAATGAATCCGATGAACATGAAGAACAGAGTAGTAGCTCAAATACTAATACCAAGACCCTCCCTTATTTTAGAAGAAAACCTTAA 738 0.4417 MDKINFVKNGELRLPPGFRFHPTDEELVVQYLKRKAFSCPLPASIIPEVDVCKLDPWDLPGDLEQERYFFSTKEAKYPNGNRSNRATNSGYWKATGLDKQIVTSKGNHVVGMKKTLVFYRGKPPHGSRTDWIMHEYRLHNTSSQTQVVQKQSHMENWVLCRIFLKRRGSAKSGGEGIESIDNISHNKVRNSRVVFYDFLAQNKTSSSSSGSGITELSTNESDEHEEQSSSSNTNTKTLPYFRRKP 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi665g00020 245 Gene3D NAC domain 23 169 IPR036093 GO:0003677|GO:0006355
Sebi665g00020 245 SUPERFAMILY NAC domain 10 165 IPR036093 GO:0003677|GO:0006355
Sebi665g00020 245 Pfam No apical meristem (NAM) protein 15 138 IPR003441 GO:0003677|GO:0006355
Sebi665g00020 245 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 222 - -
Sebi665g00020 245 MobiDBLite consensus disorder prediction 203 217 - -
Sebi665g00020 245 MobiDBLite consensus disorder prediction 203 245 - -
Sebi665g00020 245 ProSiteProfiles NAC domain profile. 14 165 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi665g00020 Sebi-Chr665 258400 259425 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi665g00020 1 205 NAC Transcription Factor Family AT5G13180 60.909 3.11e-96 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sebi665g00020 NAM 3.6e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi665g00020 - - gmx:100170709 361.303