Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi665g00019 ATGGAGGGTTTCATTGAGGAAAACAATGCAGGCAATGCTGCAGCTGCTTTGATGGCTGGTCTTGCACCCAAAACCAAGGTTCTGAGGGATGGAAAATGGAGTGAGCAAGAGGCATCAATTTTGGTACCAGGAGATGTGATTAGCATCAAGTTGGGAGACATTGTCCCTGTTGATGCCCGTCTCTTGGAGGGTGATCCTCTCAAGATTGACCAATTTGCCCTCACTGGTGAGTCCTTGCCAGTCACAAGGCACCCTGGTAGTGAGATCTTCTCTGGTTCCACTTGCAAACAGGGTGAGATTGAGGCAGTTGTCATTGCCACTGGTGTCCACACCTTCTTTGGTATTCCAATTGCCATGCCAACTGTCTTGTCTGTGACCATGGCTATTGGATCTCACCGCCTGTCTGAGCAAGGAGCCATCACTAAGAGGATGACAGCCATTGAAGAAATGGAAGGAATGGATGTTCTTTGCAGTGACAAAACTGGAACTCTCACCCTTAATAAGCTTTCCGTGGACAAGAACTTGATTGAGGTGTTTCCTGCTGGCTTGGACAAGGATGCCATTGTCTTATATTCTGCCAGAGCTTCTAGGACTGAAAACCAAGATGCCATTGATGCATCAATTGTGGGAATGTTGGGTGACCCCAAGGAGGCAAGAGCAGGAATCACTGAGGTGCATTTCTTGCCCTTCAATCCTGTGGACAAGCGCACAGCTATTACCTACATTGATAGCAATGGTGACTGGCACAGAAGCAGCAAAGGTGCTCCTAAGCAAATCATTGAGCTTTGTGCCCTCAAGGGGGAGACTTTGAAAAGGGCCCACAATCCATAG 831 0.4813 MEGFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQEASILVPGDVISIKLGDIVPVDARLLEGDPLKIDQFALTGESLPVTRHPGSEIFSGSTCKQGEIEAVVIATGVHTFFGIPIAMPTVLSVTMAIGSHRLSEQGAITKRMTAIEEMEGMDVLCSDKTGTLTLNKLSVDKNLIEVFPAGLDKDAIVLYSARASRTENQDAIDASIVGMLGDPKEARAGITEVHFLPFNPVDKRTAITYIDSNGDWHRSSKGAPKQIIELCALKGETLKRAHNP 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi665g00019 276 Gene3D - 169 272 IPR023299 GO:0000166
Sebi665g00019 276 SUPERFAMILY Calcium ATPase, transmembrane domain M 3 150 IPR023298 -
Sebi665g00019 276 Gene3D - 23 107 - -
Sebi665g00019 276 Pfam E1-E2 ATPase 22 114 - -
Sebi665g00019 276 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 163 264 IPR023299 GO:0000166
Sebi665g00019 276 Gene3D - 114 153 - -
Sebi665g00019 276 PANTHER CALCIUM-TRANSPORTING ATPASE 114 264 - -
Sebi665g00019 276 FunFam Phospholipid-transporting ATPase IC 154 166 - -
Sebi665g00019 276 SUPERFAMILY Calcium ATPase, transduction domain A 23 115 IPR008250 -
Sebi665g00019 276 Gene3D - 154 168 IPR023214 -
Sebi665g00019 276 ProSitePatterns E1-E2 ATPases phosphorylation site. 159 165 IPR018303 -
Sebi665g00019 276 Gene3D - 3 113 - -
Sebi665g00019 276 FunFam Plasma membrane ATPase 23 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi665g00019 Sebi-Chr665 234993 236912 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi665g00019 4 274 Primary Pumps ATPases AT2G07560 66.766 3.78e-131 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi665g00019 K01535 - aew:130792209 407.142