Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi665g00014 ATGTCTGAATCACATCATTTCTCTGCTTTTAACTCTCCCAGATTGGTTCTCAAGAAGGTTTTGGCCAAATCTCAACAAGAAGGGGATGGAGCAGTTAAGCGAGTTGAAGAATTTGGACCCCTTTCTCATGTTGGATCACTTCTCAGTTTGTTAACAACTCACTCACCAGTTTGCGTGTTTGACTTTGCAGTGTCTCCACCTGGAGGATTTCCTGATCATCCACACAGAGGTTTTGAGACCGTCACCTACATGCTAGAGGGAGCCATAACTCACCAAGATTTTGCTGGCCACAAGGGTACAATAAGAACTGGTGATGTTCAGTGGATGACTGCAGGCAGGGGAATAGTTCACTCAGAAATGCCTGGAGAAGCAAACAACAAGGGATTGCAACTATGGATCAATTTATCAGCCAAGGACAAAATGATTGAGCCTAATTATCAAGAACTGCCAAGTGAGAACATACCAGGAGCAGAAAAAGATGGGGTTGAAGTGAGAGTTATAGCAGGAGAAGCAATGGGAGTCCATTCACCTGTCTACACAAGAACTCCTACCATGTTCCTTGATTTCTCTATGATGCCTGGAGCTCAGTGGCATCAGAGTATTCCAGAGAGTTGGAATTCCTTTGTATATGTAATTGAAGGGGAAGGAGTATTTGGGTCTCCAAATTCATCACCAACTATGGCACACCATGTCTTGGTTTTAAGTCTAGGGGATGGCCTTAGTGTGTGGAATAACTCCTCAAAGCCTTTGAGGTTTGTGCTAATTGCAGGACAGCCACTTAATGAGCCAGTGGCTCAGTATGGGCCTTTTGTGATGAATACACAGTCTGAAATTGAGAAAACTATTGAAGACTATCAATATGCCAAGAATGGGTTTGAGATGAGGAAATATTGGAGATCTCAATAG 906 0.4327 MSESHHFSAFNSPRLVLKKVLAKSQQEGDGAVKRVEEFGPLSHVGSLLSLLTTHSPVCVFDFAVSPPGGFPDHPHRGFETVTYMLEGAITHQDFAGHKGTIRTGDVQWMTAGRGIVHSEMPGEANNKGLQLWINLSAKDKMIEPNYQELPSENIPGAEKDGVEVRVIAGEAMGVHSPVYTRTPTMFLDFSMMPGAQWHQSIPESWNSFVYVIEGEGVFGSPNSSPTMAHHVLVLSLGDGLSVWNNSSKPLRFVLIAGQPLNEPVAQYGPFVMNTQSEIEKTIEDYQYAKNGFEMRKYWRSQ 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi665g00014 301 Pfam Pirin 68 133 IPR003829 -
Sebi665g00014 301 Gene3D Jelly Rolls 52 286 IPR014710 -
Sebi665g00014 301 PANTHER PIRIN-RELATED 1 301 IPR012093 -
Sebi665g00014 301 Pfam Pirin C-terminal cupin domain 186 291 IPR008778 -
Sebi665g00014 301 SUPERFAMILY RmlC-like cupins 61 299 IPR011051 -
Sebi665g00014 301 CDD cupin_pirin_N 55 135 - -
Sebi665g00014 301 PIRSF Pirin 12 299 IPR012093 -
Sebi665g00014 301 CDD cupin_pirin_C 183 259 - -
Sebi665g00014 301 Gene3D Jelly Rolls 155 260 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi665g00014 Sebi-Chr665 147167 148664 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi665g00014 13 296 Calmodulin-binding Proteins AT3G59220 61.189 6.88e-124 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi665g00014 K06911 - gmx:100775597 479.174