Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi664g00054 ATGGAAGCTAAATTTGAGGGGGGAAATCAGTATTTGTATGGACCAGTGGTGCCAGAAATGAAGAGTGTTGGGAAGAGAAGTTTGGAATGGGATTTGAATGATTGGAAATGGGATGGAGATCTTTTTACTGCTAGGCAACTGAATTCAGTGCCATCAGATTGTGGGAGTCGTCAGCTGTTCCCAGTTGATCCTGAAATACCTGCAAATGCTGATATTTCAAACAATTTGACTTCTGGCTGGGATGATATCAACCCTGGGGAAGAAAAGAGAGAATTGGAGAAGAGGAGGAGGGGTGTTGTTGCTGAAGGGGTGGAGATGAATGATGAAATTGGTTCTCTTAATTTGAACCTTGGGGGTCAAGTATACCCTATCATGGAAGGGGAGGAAAAAAGTGGAAAGAAGACAAAGATAACTGTGACTACTTCAAACCGCGCAGTTTGTCAGGTGGAAGATTGTCGGGCTGATCTTAGTAATGCAAAGGATTACCACCGCCGTCACAAAGTTTGTGATGTGCATTCTAAGGCTAGCAGGGCACTAGTGGGAAATGTTATGCAGCGATTCTGTCAACAGTGTAGCAGGTTTCATGTTCTTCAAGAGTTTGATGAAGGGAAGAGAAGTTGTCGAAGGCGTCTGGCAGGCCACAATAAGAGGAGGAGGAAAACACATCCTGATGCTACTGCAGTTAATGGAGGTTCTCTGAATGAAGAAAGGGGCAGTAGCTATCTGTTAATGAGTTTGCTGAGGATATTGTCCAATATGCATTGTGGGATAGTGGTGGTGCAGGTAGTGGTGGCCATGACGGTGCCAATGGCAACAGTGGAGATAGTTGTTAAAGTATTAAACTTAGCAAATGGCTCAGATCATACAAGAAATGAAGATGTTCTATCTCGTCTGCTGGGGAACCTGGCAAGTCAGGCTGGTATAATTAATGGAAGTAATATGGCATCCTTATTGGAGGGATCTCAAGATTTGGTAAAAGCTGGGACATCTGGATCTGCACAAAATGTTCAAAACACAGATTCAAATTGTCCTGGACCATCCAGACCTTTCGGTTCTTCTATCAAGATGGGTAATGGTAAAATCCATCAGGACCCTCTGGAGTCTAGGTTACAGTGTGAGATGGTTCTTGCTAATGATATGACACAAAAATGTACACCTTCAGGCAGTGGTGGGGTTGGAAGTTCAAAACCTCCTTTGGGACCACAATCCTCAAATGTACTTCTGTCAAGGGGTAGCCCTCCACCCCAATCAGTTGCAGCAGAGACTACAGTTGGAAGAAATGGCTTAAGTGATATTGACCTGAATAATGTATATGATGATGTGCAGGATTATGTTGAGAACCCCAGGAATTCTCATCCTCCTGTGGCTTCAGGGATTGGGCCTCTTGATCATCCTTCATGGGTACAATGTGACTCTCTAAAGTCAAGTCCACCACAGACAAGTAGAAATTCAGATTCAACCTCTACCCAGTCACCATCTAGTTCTAGTGGAGAAGCTCAGAGTCGCACAGATCGAATTGTTTTCAAACTCTTTGGCAAGGATCCAAATGATTTTCCTCTTGTTCTTCGATCACAGATCCTTAACTGGTTATCCCACAGTCCCACAGAGATAGAGAGCTATATAAGGCCAGGCTGTATCATATTAACTATATATCTCCGCCTAGAAAATCCTGCCTGGGAGGAGCTATGCTATAATCTAGGATCCAGCTTGAGAAAGCTTCTTGCTGCATCAAATGATTCTTTTTGGAGAACAGGATGGGTATACACAAGGGTGCGACACTCTGTAGCTTTTCTGTATAATGGTCAGGTGGTCTTAGATGTGCCATTGCGCCTCAAAAGCCCACAAAATTGTCAGATTTTGTGCATTACACCACTTGCTGTTTCTGCAAGTGCAAGTGCAAAATTTATTGTGAAAGGATTCAACCTTTTCCTGTCTAGCACAAGGTTGCTCTGTGCACTTGAAGGGAAGTATCTGGTACAGGATAATTGTTATGATTTAATTGATGGTGCTGATGCAGCCATTGGACATCATGAGCTTCAGCATCTCAGCTTCTCTTGTCACATACCAAATGTGACTGGAAGAGGGTTTATTGAGGTAGAAGATATTGGTCTTAGCAGCTTTTCCTTTCCATTCATAGTTGCAGAGCAAGAAATTTGTTCAGAAATATGTCAGCTGGAGAATGTCATTGAGGCCGCAGAGACTACTGATGACATCCAGATAAAAACCAAACTAATGGAAGAAAAAACTCGAGCATTGTATTTCATACAAGAAATGGGTTGGCTCCTTCATAGAAGTCGTGTGAAAGTTAGGCTAGGTCCAATGGCACCTGTCCATGATCGCTTCCATTTTAATCGGTTCACATGGCTTGTTGGCTTCTCTATGGACCATGATTGGTGTGCTGTGATGAAAAAACTCTTAGATATTATCTTTGATGGTGCTGTTGATACAGGAGAGCATACCTCCATTAAGCTTGCATTATTAGACATGGATCTTCTACACAGAGCTGTAAAGAGAAATTGCAGGCCTATGGTGGAACTACTGTTAAACTTTGTGCCAGTTAAAGCCTCAGATGGTGAAGACACTAAAGAGAAGCAAGCCAACAAGTCCCCTGACATATTCTTATTTAGACCTGATACTATTGGGCCTGTTGGGTTGACACCCCTTCATGTTGCAGCAAGTACAAATGGCTCTGAGAATGTATTGGATGCATTAACTGATGATCCAGGAATGGTGGGAACTGAGGCGTGGAAAAGTGTCAAGGACAACACAGGTTTGACACCCTATGACTATGCATCCCTGAGGGGCTACTACTCCTACATTCAACTTGTTCAAAGGAAAACAAGCAAGAAATGTGAAAGCCAACATGTGCTTGATATCCCAAGCACCCTTGTAGACAGTAACATAAAGCAGAAGCAATCAGATGGGCACAGGTCATCAAAAGTTTCAAGTTTGCAGACTGAGAAGATTGAAATAACAGCAATGTCACACCAATGTGGGCTCTGCCAACACAAGCTGGCGTACGGTGGCGTGAGAAGGCCACTTGTTTATAGGCCGGCAATGCTGTCAATGGTGGCCATTGCAGCTGTATGTGTCTGTGTGGCTTTGCTCTTCAAAAGCTTACCAAAAGTTTCTTATGTATTCCAGCCCTTCAACTGGGAATCATTGGAGTATGGGTCAATCTAA 3183 0.4332 MEAKFEGGNQYLYGPVVPEMKSVGKRSLEWDLNDWKWDGDLFTARQLNSVPSDCGSRQLFPVDPEIPANADISNNLTSGWDDINPGEEKRELEKRRRGVVAEGVEMNDEIGSLNLNLGGQVYPIMEGEEKSGKKTKITVTTSNRAVCQVEDCRADLSNAKDYHRRHKVCDVHSKASRALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHPDATAVNGGSLNEERGSSYLLMSLLRILSNMHCGIVVVQVVVAMTVPMATVEIVVKVLNLANGSDHTRNEDVLSRLLGNLASQAGIINGSNMASLLEGSQDLVKAGTSGSAQNVQNTDSNCPGPSRPFGSSIKMGNGKIHQDPLESRLQCEMVLANDMTQKCTPSGSGGVGSSKPPLGPQSSNVLLSRGSPPPQSVAAETTVGRNGLSDIDLNNVYDDVQDYVENPRNSHPPVASGIGPLDHPSWVQCDSLKSSPPQTSRNSDSTSTQSPSSSSGEAQSRTDRIVFKLFGKDPNDFPLVLRSQILNWLSHSPTEIESYIRPGCIILTIYLRLENPAWEELCYNLGSSLRKLLAASNDSFWRTGWVYTRVRHSVAFLYNGQVVLDVPLRLKSPQNCQILCITPLAVSASASAKFIVKGFNLFLSSTRLLCALEGKYLVQDNCYDLIDGADAAIGHHELQHLSFSCHIPNVTGRGFIEVEDIGLSSFSFPFIVAEQEICSEICQLENVIEAAETTDDIQIKTKLMEEKTRALYFIQEMGWLLHRSRVKVRLGPMAPVHDRFHFNRFTWLVGFSMDHDWCAVMKKLLDIIFDGAVDTGEHTSIKLALLDMDLLHRAVKRNCRPMVELLLNFVPVKASDGEDTKEKQANKSPDIFLFRPDTIGPVGLTPLHVAASTNGSENVLDALTDDPGMVGTEAWKSVKDNTGLTPYDYASLRGYYSYIQLVQRKTSKKCESQHVLDIPSTLVDSNIKQKQSDGHRSSKVSSLQTEKIEITAMSHQCGLCQHKLAYGGVRRPLVYRPAMLSMVAIAAVCVCVALLFKSLPKVSYVFQPFNWESLEYGSI 1060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi664g00054 1060 MobiDBLite consensus disorder prediction 381 433 - -
Sebi664g00054 1060 MobiDBLite consensus disorder prediction 469 501 - -
Sebi664g00054 1060 Gene3D - 138 208 IPR036893 GO:0003677|GO:0005634
Sebi664g00054 1060 Gene3D - 810 959 IPR036770 -
Sebi664g00054 1060 MobiDBLite consensus disorder prediction 381 430 - -
Sebi664g00054 1060 MobiDBLite consensus disorder prediction 328 347 - -
Sebi664g00054 1060 MobiDBLite consensus disorder prediction 70 89 - -
Sebi664g00054 1060 MobiDBLite consensus disorder prediction 211 231 - -
Sebi664g00054 1060 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 131 857 IPR044817 GO:0003677
Sebi664g00054 1060 SUPERFAMILY Ankyrin repeat 829 943 IPR036770 -
Sebi664g00054 1060 FunFam Squamosa promoter-binding-like protein 14 138 208 - -
Sebi664g00054 1060 ProSiteProfiles Zinc finger SBP-type profile. 144 221 IPR004333 GO:0003677
Sebi664g00054 1060 SUPERFAMILY SBT domain 145 226 IPR036893 GO:0003677|GO:0005634
Sebi664g00054 1060 Pfam SBP domain 147 220 IPR004333 GO:0003677
Sebi664g00054 1060 MobiDBLite consensus disorder prediction 467 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi664g00054 Sebi-Chr664 519650 528178 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi664g00054 1 1059 SBP-box Gene Family AT3G60030 46.704 0.0 801
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Sebi664g00054 SBP 1.7e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi664g00054 - - gmx:100776125 1686