Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi664g00045 ATGGAAAATAATAATGAAAATGTTGATGAGAATGTCGTTGGGTTGGAAGATATTGTAAGTGAAGATGAAGTTGACACTGCAAGTGATTATGATCCTGATCAATTTGTCTTCGCTGTGGATTCGGAGGCTGATTTTGTGAAATTAAACCAAGAAATGTTATGTGTGGAAAATGTTAGTAAATTTAATTTTCCAAATTTGGAGGTTGCTTATGACTTTTATAATTGGTATGGGAAGAAGACTGGATTTTCTGCACGGAAGAGCAAAGTCCGTAAGAATGCAATGGGTGAAATTTATGAGAAGACATACCTTTGCCACAGGGAAGGAAAGCGACCAAATAACATGAAACCAGAAAAGGGGAAGAAAAAACGTCCAGCCAAGCCGGAGACAAGGTGTTCTTGCCCTGCAAAAATGAAGGTTCGGCTCGATGGACCATCTGGCCGTTGGAACGTGTCTAAGTTCTGTGATGCGCATAACCATGATATGCTACCCCCCAAATATGAAGGGATGCTGCCTGCTCATAGGAAAATGAGTGTAGCTGACATCTTGGAGATGAATAACATGCGAGATGCCGGTATTAGTACACCACAGATTTATGGGTCATTTGCTAGTCAATCTGGAGGTTACAATAATGTTGGCTTTCGTAAAAGAGATCTTTACAATGAGATTGGTAGGCAAAGAATGTTGCAGTTGAGTGATATAAAGGGTGCTATTAAGTATTTACGTGAAAGGGAGGTCAATGAAGGGTCTATGTTTTGGAGGTACACGACTGATTGTGAAGTTGCTGATGAAACTGAGGGTACTTATGTGTGGGTTTTGGAACAGCTGATGGTGGCAATGAAAGACAAGATGCCTTCAGCAGTGATAACAGATGGTGACCTTGCTATGCGGAATGCCATCAAAAGAGTTTTACCCAATGCTCACCATAGGCTTTGTGCATGGCACCTGTGTCGTAATGCAGCCAGTAATGTTAAGAATCCTGAGATGGTTTCCATGTTTAGGAAATGTATGTTGGGTGATTATGAGGTTTCCGAGTTTAAACATAGGTGGGAGGTAATGGTGAAGGAATTTAGACTGGAGGATAACAATTGGGTGAAGGAAATGTATGACAAGAAGAGGATGTGGGCTACAGCTTATATAAGGGGGAAATTCTTTGCAGGGTTTAGGACAACTTCTCGATGTGAGGGGTTGCACGGGCAACTAGCCAAGTTTGTACACTCCCGTCATGATTTAGTGGCTTTCTTGAAAAATTTTGATCGTTTCCTTGAGGTACTAAGGTATAATGAGCTTGAAGCTGATTTTGAGTCAGTCTGTGGTGACATGATGTTGGAAACTAACCTGCATGCACTAGAGAGATCAGCGTCTAAGATTTTCACAAAGGAGGTTTTCATATTGGTGCGTCCCGCCATTGCTAGGGGAAGCACGATGAGGGTGATTGGTTGTACACAGCTGATGTCCCAAACCATTTTTACTGTCACGAAGTATGGAAGATCTCATAAGGAGTGGCAAGTGTCTTATATTGAACAACCATTGTTACTTAAATGTTCTTGTCAAAGAATGGAGTCCTTTGGACTGCCTTGTGACCACATAATAGGTGTCATGGTACACTTGAACATACAAGAGCTGCCAAATAGTCTTGTGTTAAGTAGATGGACCATGGGTGTGAAGGAAAATGCTATTGAAATAAGGGATGGACGTAATTCCATTTGGGATTCTGTCTTTGATGCACGTTGTGGTTATTTGGACTTTTTGTGTAAGAAGATGAATAGGTTGGGGGGTAGGTCTACTACAAGATTCAATGACATTAAGGATTGGGTTAGCAATAAAATAATTGTGTATAGTGAAGCAGATGTCTCTAGTGGTGAGGGTAATGAAAATCTTAGTGATGAAGTGGGATCTACATTGAAAGATCCAATTAGAGTTGGTTCCAAGGGCTGTGCTGCTGGTTCGTCTACTCAAGCAAGAAGACGACCTCATAAATGCAGGCAATGTGGTGTTGTTGGTCACAACAGAACAACATGCCCACACAAAAGGAAATTTGATGCCTTCGTTGAGTCAGGAGTTCATGAAGACGGTGTAAGTCACGTCTCCGCTGAAGGTGTTTAG 2103 0.4156 MENNNENVDENVVGLEDIVSEDEVDTASDYDPDQFVFAVDSEADFVKLNQEMLCVENVSKFNFPNLEVAYDFYNWYGKKTGFSARKSKVRKNAMGEIYEKTYLCHREGKRPNNMKPEKGKKKRPAKPETRCSCPAKMKVRLDGPSGRWNVSKFCDAHNHDMLPPKYEGMLPAHRKMSVADILEMNNMRDAGISTPQIYGSFASQSGGYNNVGFRKRDLYNEIGRQRMLQLSDIKGAIKYLREREVNEGSMFWRYTTDCEVADETEGTYVWVLEQLMVAMKDKMPSAVITDGDLAMRNAIKRVLPNAHHRLCAWHLCRNAASNVKNPEMVSMFRKCMLGDYEVSEFKHRWEVMVKEFRLEDNNWVKEMYDKKRMWATAYIRGKFFAGFRTTSRCEGLHGQLAKFVHSRHDLVAFLKNFDRFLEVLRYNELEADFESVCGDMMLETNLHALERSASKIFTKEVFILVRPAIARGSTMRVIGCTQLMSQTIFTVTKYGRSHKEWQVSYIEQPLLLKCSCQRMESFGLPCDHIIGVMVHLNIQELPNSLVLSRWTMGVKENAIEIRDGRNSIWDSVFDARCGYLDFLCKKMNRLGGRSTTRFNDIKDWVSNKIIVYSEADVSSGEGNENLSDEVGSTLKDPIRVGSKGCAAGSSTQARRRPHKCRQCGVVGHNRTTCPHKRKFDAFVESGVHEDGVSHVSAEGV 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi664g00045 700 ProSiteProfiles Zinc finger SWIM-type profile. 499 537 IPR007527 GO:0008270
Sebi664g00045 700 SMART 26again6 512 539 IPR006564 GO:0008270
Sebi664g00045 700 MobiDBLite consensus disorder prediction 108 130 - -
Sebi664g00045 700 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 56 580 IPR031052 GO:0006355
Sebi664g00045 700 Pfam FAR1 DNA-binding domain 71 162 IPR004330 -
Sebi664g00045 700 Pfam SWIM zinc finger 489 537 IPR007527 GO:0008270
Sebi664g00045 700 Pfam MULE transposase domain 260 318 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi664g00045 Sebi-Chr664 449953 452327 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi664g00045 FAR1 2.2e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi664g00045 - - adu:107465142 537.724