Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi664g00035 ATGGGGAGAGCTCCTTGTTGTGAGAAGGTGGGGTTGAAGAAAGGAAGATGGACTGCTGAAGAAGATAAGATCTTGACTGATTACATCCAAGAAAATGGTGAGGGATCTTGGAGGTCCTTGCCCAAAAATGCAGATGTGAAGAGAGGGAACATCACTCCTCAAGAGGAAGAGATCATTGTCAAGTTGCATGCTGTTCTTGGTAACAGGTGGTCAGTAATAGCAGGACATTTGCCAGGACGTACAGATAATGAGATAAAAAACTATTGGAATTCTCATTTGAGGAGAAAAATTTACTGCTTCATGAAGTCATTAAATGAGTCTCTCCCTCCCATTGACATGGCAGCTGTTACTTCCAAAAGAAGAGCAAGTAGAGCTACACCAACTCAACTTGTCAAGCAAGAGGACAATAACAACAACCACATTGCTTTCAACCAACAAAAGAAAGACAACATTCCTCAAGTTCAAGTTCAAGTTCAACCAACACATAAAAGATCAAAAGTAACTTCATCACAGAGTTTGAATGCTGCAGAGGCTGAAGTTACTTCTGGATCATGGCACCAACATGGAGAGGACATTCAACAAGGCTATGCTTATGGTGAGAGGGAATGCAACACAAGTGGTACAATTGCCTCATGTCCCAATTTGGATGAAGTTGAGGCATTGGGACCATATCAATGGTTAGATGAAGAAATTATGAAACTTAGTTACATGTTTGAAAGTGGGGTACTTGTAAGCCCTGTTGGGAATGGCATTGTAGAGGATCCTAGCTGTGGTGGAGTAGTGGTGGGTGAAGAGATTATGGGGATGAATGAGGAAAGTAAGAGTGGTGTTTGGAGCTCATCAAATGCAGAGAGTGGAGAATGGAACACTACAAGCTGTTCATCTGTGAATTCTGCTCATGAGTATCAATGGCCTGATATGCATTTAGAAGGTAGTGTTCAATCCTATAATAATCAGTGGGACCTTTATGGTGAAAACCAGAACGTTAATTACTTGTGGGGTACTAGCAGTTGTGAAGTAAGTGGCTTTTATCAGTGA 1038 0.4152 MGRAPCCEKVGLKKGRWTAEEDKILTDYIQENGEGSWRSLPKNADVKRGNITPQEEEIIVKLHAVLGNRWSVIAGHLPGRTDNEIKNYWNSHLRRKIYCFMKSLNESLPPIDMAAVTSKRRASRATPTQLVKQEDNNNNHIAFNQQKKDNIPQVQVQVQPTHKRSKVTSSQSLNAAEAEVTSGSWHQHGEDIQQGYAYGERECNTSGTIASCPNLDEVEALGPYQWLDEEIMKLSYMFESGVLVSPVGNGIVEDPSCGGVVVGEEIMGMNEESKSGVWSSSNAESGEWNTTSCSSVNSAHEYQWPDMHLEGSVQSYNNQWDLYGENQNVNYLWGTSSCEVSGFYQ 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi664g00035 345 CDD SANT 52 93 IPR001005 -
Sebi664g00035 345 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 39 IPR017930 -
Sebi664g00035 345 Gene3D - 52 97 - -
Sebi664g00035 345 ProSiteProfiles Myb-like domain profile. 9 93 IPR001005 -
Sebi664g00035 345 Gene3D - 11 45 - -
Sebi664g00035 345 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 97 IPR017930 -
Sebi664g00035 345 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 179 - -
Sebi664g00035 345 SMART sant 47 95 IPR001005 -
Sebi664g00035 345 SMART sant 13 45 IPR001005 -
Sebi664g00035 345 Pfam Myb-like DNA-binding domain 48 93 IPR001005 -
Sebi664g00035 345 SUPERFAMILY Homeodomain-like 11 89 IPR009057 -
Sebi664g00035 345 MobiDBLite consensus disorder prediction 160 184 - -
Sebi664g00035 345 FunFam Myb transcription factor 52 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi664g00035 Sebi-Chr664 342048 344297 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi664g00035 1 234 MYB Transcription Factor Family AT5G49330 43.478 2.21e-55 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sebi664g00035 Myb_DNA-binding 1.1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi664g00035 K09422 - gmx:100805532 404.445