Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi663g00017 ATGGGCATCGCTTATCGCGACCTTAAACCCGAAAACGTCCTCATTCACCACACCGGCCACGTCACCCTCACCGACTTCGATCTCTCTCGCAAGCTCAAACCAAAAACCGTCAAAACCATCATTTCCCTCGACGATTCCAAGGTACTTCCCGACACTCGCCGTAAATCTCGCCGCTGGTTGATCCCACTTGTGCCCCCACCACACGACAGGAAGGCGCTGAAGAATAATGCCAAGTCTGCCCGAGTCAGCCCGGTGAGTCGACGCAAGGCGAGTTTCTGTCTCTCTAACGGCGAACGATCCAACTCGTTTGTCGGCACGGAGGAGTACGTCGCGCCGGAGGTGGTTCGCGGCGACGGTCACGAGTTCGCCGTCGATTGGTGGGGCCTTGGAGTGCTGACCTATGAGATGCTCTACGGGACGACGCCGTTTAAAGGGAAGAACAGGAAGGAAACGTTTCGAAACGTGCTGGTGAAGGAACCGGAGTTTGTGGGGAAGAAAACGGCGTTGACGGATCTTATTTCACGGTTGCTTGAGAAGGATCCCACTAAACGATTGGGTTACGTTAGAGGTGCCTGTGAGATCAAGGAGCATGAGTTCTTCAGAGGGGTTAAGTGGGACCTACTGACGGAGGTTGTGCGACCGCCGTTTATTCCGTCGAGAGATGACTCTGTTTTGACGGCGGATCGATTCGCTTCTGGAGTTGACATAAGGGAATATTTCAAGAGCTTGAAAAAACCGCCGTCGTTGCCACCTTCGCCGTTACCGTCCCCGTCTTATTCTGAGTTTCAGAAGAGTGTTTCTTTTGCAGAATTCTGA 816 0.5331 MGIAYRDLKPENVLIHHTGHVTLTDFDLSRKLKPKTVKTIISLDDSKVLPDTRRKSRRWLIPLVPPPHDRKALKNNAKSARVSPVSRRKASFCLSNGERSNSFVGTEEYVAPEVVRGDGHEFAVDWWGLGVLTYEMLYGTTPFKGKNRKETFRNVLVKEPEFVGKKTALTDLISRLLEKDPTKRLGYVRGACEIKEHEFFRGVKWDLLTEVVRPPFIPSRDDSVLTADRFASGVDIREYFKSLKKPPSLPPSPLPSPSYSEFQKSVSFAEF 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi663g00017 271 SMART serkin_6 1 200 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi663g00017 271 ProSiteProfiles AGC-kinase C-terminal domain profile. 201 271 IPR000961 GO:0004674|GO:0005524|GO:0006468
Sebi663g00017 271 FunFam Serine/threonine-protein kinase OXI1 98 219 - -
Sebi663g00017 271 Gene3D Transferase(Phosphotransferase) domain 1 97 219 - -
Sebi663g00017 271 SUPERFAMILY Protein kinase-like (PK-like) 1 260 IPR011009 -
Sebi663g00017 271 PANTHER FLIPPASE KINASE 1-RELATED 1 221 - -
Sebi663g00017 271 Pfam Protein kinase domain 95 200 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi663g00017 271 Pfam Protein kinase domain 1 37 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi663g00017 271 ProSitePatterns Serine/Threonine protein kinases active-site signature. 3 15 IPR008271 GO:0004672|GO:0006468
Sebi663g00017 271 Gene3D Transferase(Phosphotransferase) domain 1 1 56 - -
Sebi663g00017 271 ProSiteProfiles Protein kinase domain profile. 1 200 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi663g00017 Sebi-Chr663 426576 427391 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi663g00017 1 271 AGC Kinase Gene Family AT3G20830 62.132 4.94e-106 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Sebi663g00017 Pkinase 5.2e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi663g00017 - - mof:131149664 368.622