Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi663g00015 ATGGGCTCAATGAACTCAAACAACTGGCTTTCTTTCCCCCTTTCTCCAACTCATTCTTCTTTACCAGCTCATCTCCAAGCAACTCAATCTCATCAGTTTTCTCTTGGGACATTAGTCAATGAGAACATGGAAAGCCCTTTCCAAAATCATGATTGGAATCTGATTAATACTCACAGCAGCAACGAAGTTCCTAAGGTTGCAGATTTTCTTGGTGTGAGCAAGTCTGAGAATCAGTCAGATCTTGCAGCTTTTAATGAAATTCAATCCAATGATTCAGATTACCTCTTCACCAACAACAGTAGCCTCATGCCGATGCAAAACTCAGTGGTGGCTACTAATTCTAGCAGTACTTATGAGTATCAAGAAAACAGTGCTAACAATAACCTTCAGTCATTGACATTATCCATGGGAAGTGGTAAGGATTCAACATGTGAAACTAGTGGTGATAATAATAGTACTAATACTGTTGAAGCTGCACCTAGAAGAACTTTGGATACCTTTGGCCAGAGAACATCAATATACCGTGGTGTAACAAGACATAGATGGACTGGAAGGTATGAAGCTCACCTTTGGGATAATAGCTGTAGAAGGGAAGGACAATCAAGAAAAGGTCGCCAAGTCTATTTGGGTGGGTATGACAAAGAAGAGAAAGCAGCAAGGGCCTATGATTTAGCTGCACTCAAATACTGGGGGACATCTACCACTACCAACTTTCCC 717 0.4114 MGSMNSNNWLSFPLSPTHSSLPAHLQATQSHQFSLGTLVNENMESPFQNHDWNLINTHSSNEVPKVADFLGVSKSENQSDLAAFNEIQSNDSDYLFTNNSSLMPMQNSVVATNSSSTYEYQENSANNNLQSLTLSMGSGKDSTCETSGDNNSTNTVEAAPRRTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAALKYWGTSTTTNFP 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi663g00015 239 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 62 239 - -
Sebi663g00015 239 SMART rav1_2 173 239 IPR001471 GO:0003700|GO:0006355
Sebi663g00015 239 Gene3D AP2/ERF domain 173 239 IPR036955 GO:0003700|GO:0006355
Sebi663g00015 239 PRINTS Ethylene responsive element binding protein signature 174 185 IPR001471 GO:0003700|GO:0006355
Sebi663g00015 239 PRINTS Ethylene responsive element binding protein signature 221 239 IPR001471 GO:0003700|GO:0006355
Sebi663g00015 239 CDD AP2 172 239 IPR001471 GO:0003700|GO:0006355
Sebi663g00015 239 Pfam AP2 domain 173 231 IPR001471 GO:0003700|GO:0006355
Sebi663g00015 239 SUPERFAMILY DNA-binding domain 172 239 IPR016177 GO:0003677
Sebi663g00015 239 FunFam AP2-like ethylene-responsive transcription factor ANT 172 239 - -
Sebi663g00015 239 ProSiteProfiles AP2/ERF domain profile. 173 239 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi663g00015 Sebi-Chr663 350921 352132 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi663g00015 4 239 AP2-EREBP Transcription Factor Family AT1G51190 65.019 2.84e-105 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sebi663g00015 AP2 2.7e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi663g00015 K09285 - gmx:100788471 413.69