Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi663g00014 ATCAGTAACTATGAAAAGGAATTGGAAGACATGAAGCACATGACTAGACAAGAATTTGTGGCCGCCATAAGAAGGAAGAGCAGTGGATTCTCAAGAGGTGCATCAATGTATCGTGGAGTCACAAGGCATCACCAACATGGAAGATGGCAAGCAAGGATTGGCAGGGTTGCAGGAAACAAAGATCTATATTTAGGAACTTTCAGTACTGAAGAAGAAGCTGCAGAAGCATACGACATTGCTGCAATAAAGTTCAGAGGACTCAATGCAGTTACAAATTTCGACATGAGTCGTTACGATGTGAAAGCCATACTTGAAAGTAACACTCTCCCAATAGGAGGAGGAGCTGCCAAACGCCTGAAAGAGGCTCAAGCATTGGAATCTTCTAGAAAAAGAGAAGAGATGATAGCACTTGGATCAAGTTTTCAATATGGAAGCTCAAGCTCAAGTAGGCTACAAGGTTACCCTCTAATGCAGCATCAGTTTGACCAACCTCAACCATTGCTAACACTCCAAAACCAGGACATGTCACAGTATAGCACTACTCATCATGATCACTTTCATCAGAGTTACATACAAACACAGCTTCAGTTGCACCATCACCAGCAGAGTGGATCATACATGCAGCAATCAAATAATAATAGTAACAGTAACAATGGACAGTTTTATAACAGTTATCTTCAGAACCACCCGGCTTTGCTTCAGGGGTTGATGTCTTCGATGGAAGGTGGAGGGTCAAGTGGGAGTTATAGTGGAGGGTATATGGGGAATAATCATAATAATGGACTTGGAATGGCTTCGAGTTCTTCAAATAATGCAACAGCATCAGCGGAGGAACTTGCACTTGTTAAGGTTGATTACGACATGCCTTCCGGAGGTTATGGCGGCTGGTCGGCGGCGGACTCCATGCAAGCCTCGAATGGAGCTGGTGTTTTCACAATGTGGAATGAATGA 951 0.4353 ISNYEKELEDMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKAILESNTLPIGGGAAKRLKEAQALESSRKREEMIALGSSFQYGSSSSSRLQGYPLMQHQFDQPQPLLTLQNQDMSQYSTTHHDHFHQSYIQTQLQLHHHQQSGSYMQQSNNNSNSNNGQFYNSYLQNHPALLQGLMSSMEGGGSSGSYSGGYMGNNHNNGLGMASSSSNNATASAEELALVKVDYDMPSGGYGGWSAADSMQASNGAGVFTMWNE 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi663g00014 316 PRINTS Ethylene responsive element binding protein signature 37 48 IPR001471 GO:0003700|GO:0006355
Sebi663g00014 316 PRINTS Ethylene responsive element binding protein signature 76 96 IPR001471 GO:0003700|GO:0006355
Sebi663g00014 316 CDD AP2 35 96 IPR001471 GO:0003700|GO:0006355
Sebi663g00014 316 ProSiteProfiles AP2/ERF domain profile. 36 94 IPR001471 GO:0003700|GO:0006355
Sebi663g00014 316 Gene3D AP2/ERF domain 36 96 IPR036955 GO:0003700|GO:0006355
Sebi663g00014 316 SMART rav1_2 36 100 IPR001471 GO:0003700|GO:0006355
Sebi663g00014 316 Pfam AP2 domain 37 86 IPR001471 GO:0003700|GO:0006355
Sebi663g00014 316 FunFam AP2-like ethylene-responsive transcription factor 35 96 - -
Sebi663g00014 316 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 201 - -
Sebi663g00014 316 MobiDBLite consensus disorder prediction 198 221 - -
Sebi663g00014 316 SUPERFAMILY DNA-binding domain 35 96 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi663g00014 Sebi-Chr663 349587 350824 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi663g00014 20 99 AP2-EREBP Transcription Factor Family AT3G20840 37.500 3.34e-12 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sebi663g00014 AP2 2.3e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi663g00014 K09285 - gmx:100788471 422.165