Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi660g00026 ATGGCAGCAGAAGTGACTGGAGAAGATATTGTGAGGTCAATGAGTGATGGAAGGAGGAGTTTTGGGGAGTGGTCCTCAGCAAGCTTGCATGATGCAGTTGTTGGACAGGGTGATGTGTTTCAAAGAAGTGGAAGGGAAATAGATGAAGAGGAGGAGCTGAAGTGGGAAGCTTTGGGGAGGCTTCCAACATATGATAGGTTGAGGAAAGGGATTCTGAAGCAAGTTCTAGAAAATGGGAGGGTTAACTATGAAGAGATTGACATCACCAAACTTGGAGTGCAGGAAAAGAAGTATATCCTTGAGAGCATACTGAAGACTGCTGAAGAAGATAATGAGAAATTTCTTCATAGAATGAGGGACAGAATAGATAGGGTTGGAATTGAAATTCCCAAGATTGAAGTCAGGTTTGAGCATTTATCAGTTGAAGGAGATGCATATATTGGAACCAGGGCCTTACCAACACTACTCAATACTACCCTGAATGTAGTAGAGGGACTTCTTGGATATTTCAAGCTTTTGCCATTTAAGAAAAGGGTTGTCAAGATTCTCAAAGATGTCAGTGGAATTGTGAAACCATCAAGAATGACTTTGCTTTTGGGACCTCCAGGATCAGGAAAAACAACACTCCTCCAGGCACTTGCTGGAAAAATGGACAAGGATCTAAGGGTATCAGGAAGAGTCACATACTGTGGTCATGAATTGTCAGAGTTTTTTCCCCAAAGAACATGTGCTTATATTAGTCAGCATGATCTTCACCATGGAGAAATGACAGTGAGAGAGACACTGGACTTCTCTGGACGCTGCTTGGGAGTTGGAGCAAGGTATGATCTGCTGGCAGAATTGTCAAGAAGAGAACTAGTAGCAGATATCAAACCAGATCCTGAAATTGATGCTTTCATGAAAGCCACAGCAGTGGAAGGTCAAGAAACAAGTCTTGTTACAGATTATATTCTCAAGATTCTTGGATTGGAAATATGTGCTGATATTTTGGTGGGAGATGAAATGAGAAGGGGCATATCTGGTGGACAAAAGAAGCGTTCAACTACTGAATCATTCATTTTGTCAGTTCTAATAAACAGTAACTTGTGTAAACTGAATGGTGCAGGTGAGATGTTGGTAGGACCTGCAAAAGCCTTCTTCATGGATGAAATTTCAACTGGTTTGGATAGTTCCACTACCTTCCAAATCATCAAGTTTATGAGACAGATGGTCCATATCATGGATGTTACTATGATAATCTCTCTTCTGCAACCTGCACCAGAAACATATAACCTTTTTGATGACATAATATTACTTTCTGAAGGCTTCAAATGCCCAGAAAGGAAAGGAGTTGCAGACTTTTTACAGGAGGTAACTTCCAAAAAGGACCAAGAACAATACTGGTTCAGAAGGGACATACCTTACCAATATATTAGTGTGCCTGAGTTTGTAGCACACTTCAACAATTACTGCATTGGCCAACAACTTCATGAAGAGATTCAAGTTCCATTTGATTCTAATAAAACTCACCCTGCTGCATTGGTCAAGGAAAAAACAGAAATGAAGCATGGTCAACTTGAAGATGGAGGAAAATATTATGGTGCACTATTTTTCAGTCTCATCAATGTAATGTTCAATGGAGTGGCAGAGCTAGCAATGACTATTAATAGACTTCCTGTTTTCTTCAAGCAAAGAGATTTCCTGTTTTATCCATCATGGGCTTTTGCATTGCCCATCTGGGTCCTTAGAATTCCTCTCTCTCTATTGGAGTCAGGAATATGGATCATCCTCACCTATTATACTATTGGCTTTGCTCCTTCAGCTAGTAGGTTTTTTCGTCAATTATTGGCATTCTTCTGTGTGCATCAAATGGCTCTATCCCTTTTCCGCTTCATTGCTGCAATTGGAAGAACAAAAGTTGTGGCAAACACACTTGGTATTTTCACAATTTTAGTTGTTTTTGTCCTAAGTGGATTTACTATTTCAAAAGATGATATTGAGCCATGGATGATATGGTGCTATTATGCTTCACCTATGATGTATGGACAGACTGCAATAGCCATCAATGAGTTCCTAGACAAAAGATGGAGTGCTCCTAATAATGACCCAAGAATTCTTGAGCCCACAGTTGGGAAGGCTTTTCTTAAGGCCAGAGGCATATTTACAGAAGACTATTGGTATTGGATCTCTGTTGGTGCCCTTATAGGATTTTCTCTGCTTTTCAACATTTGTTTTATTCTTGCTCTAACTTATTTAAATCCATTTATAAGCTCCAAATCTATTATAGTGGAAGAGGAAGACAGTAGGAAAACCATGACTGCATCCTCCTCAGGGAAAAAACTGGCAACAGAAAATTCAGAGAAGAATTCAGCTTCAAATGCTAAACGGTTTGAAGGTATTGATCTGGAAGTAAGAAACACCACACATAGCCCAATTACTAAAGCTGCAGAATTTTCAAAGTCCAAGAAGGGAATGGTGTTGCCCTTTCAGCCTCTGTCACTTGCTTTTGAAAATGTGAATTATTACATCGATATGCCAAATGAAATGAAGAAACAAGGAATTGAAGAGAATAGACTCCAACTACTAAAAGATATAAGTGGTGCTTTCAGGCCTGGAGTTTTAACAGCATTAGTTGGTGTAAGTGGTGCTGGAAAAACCACCTTGATGGATGTGCTTGCAGGAAGGAAAACTGGTGGTTATATTGAGGGAAGCATCAACATATCCGGTTATCCAAAGAACCAATCAACTTTTGCTCGGATTAGTGGTTATTGTGAACAAAATGATATCCATTCTCCAAATGTTACAGTCTATGAATCTCTTCTGTTTTCTGCTTGGCTGCGTCTCAGTAAGGAGGTTGATAAAGAAACAAGAAAGATGTTTATTGAGGAAGTTATAGAGCTGGTCGAGCTACATTCAGTGAGGAATTTTATAGTAGGCCTTCCAGGAATAGATGGCTTATCAACTGAGCAAAGAAAGAGGCTTACCATCGCTGTAGAGTTGGTTGCAAATCCTTCAATTATCTTTATGGATGAGCCAACAACTGGTCTTGATGCTAGAGCTGCAGCAGTTGTTATGCGTACTGTTAGAAATACAGTAGATACAGGGAGAACTGTTGTATGCACAATTCATCAACCAAGCATTGATATATTTGAACATTTTGATGAGCTGCTTTTGATGAAGAGAGGTGGACAAGTGATATATGGTGGTCCTCTTGGTCGAAATTCTGAGAAGCTTATAGAGTACTTTGAGGCTATTACAGGAATTCCTGAGATTAAAGATGGATATAATCCAGCCACATGGATGCTGGAGATCACTTCTCCCTTAGTTGAATCTCAGCTTGATATAGACTTTGCTGAATTATACACTAAGTCAGACCTTTACCAAAAGAACCAGGAACTTATTAAGGAACTATGCACACCAGTACCTGGAACAAAGGATCTTTATTTTCCATCAAAATACTCCCAATCCTTTGTTACTCAATGCAAAGCTTGCTTCTGGAAACAGTACTGCTCCTATTGGAGGAATCCACAGTATAATGCTGTCAGATTATTCATCACTATAATTATTGGCATCATTTTTGGACTAATTTATTGGAATAAAGGAGAAAAGATGCAAAAGGAACAAGACCTGTTGAATCTCGTTGGAGCTATGTATTTATCTGTTATTTTCCTTGGAGCCTCCAACACTAGCAGTGTGCAACCTGTTGTTGCAATAGAAAGAACAGTTCTCTACCGTGAAAGAGCTGCTGGAATGTACTCAGAACTGCCCTATGCAATTGGTCAGGTAGCAATTGAAGTAATTTATGTTGCAATCCAAAGTCTAGCCTATTCCATTATCCTCTACTGGATGATTGGGTTGCCATCACAAGTTGATAATTTCTTATGGTTCTACTACTTCATATTCATGTCCTTCATGTACTTCACACTGTATGGAATGATGACTGTAGCTCTGACACCAAACCACCAAATTGCTGCAATTGTTATGTCTTTCTTCATCAGTTTCTGGAACCTGTTCTCTGGTTTTCTTATCCCAAGAACGCAAATTCCAATATGGTGGAGGTGGTACTACTGGGCATCCCCTGTGGCATGGACTATATATGGATTGGTGACATCACAGGTGGGTGACAAGAACAGTCCAATAGAAGTTCCTGGGTTTAAGCCAATGACAATAAAAGAGTACCTTGAGAAACGGTTGGGCTTTCAACATGACTTCCTTGGGGTTGTTGCTTTGACTCACATTGCTTTCAGCCTCCTCTTCCTTTTTGTATTTGCTTATGGCATCAGGTTCCTAAACTTCCAGAAAAGATAA 4287 0.3968 MAAEVTGEDIVRSMSDGRRSFGEWSSASLHDAVVGQGDVFQRSGREIDEEEELKWEALGRLPTYDRLRKGILKQVLENGRVNYEEIDITKLGVQEKKYILESILKTAEEDNEKFLHRMRDRIDRVGIEIPKIEVRFEHLSVEGDAYIGTRALPTLLNTTLNVVEGLLGYFKLLPFKKRVVKILKDVSGIVKPSRMTLLLGPPGSGKTTLLQALAGKMDKDLRVSGRVTYCGHELSEFFPQRTCAYISQHDLHHGEMTVRETLDFSGRCLGVGARYDLLAELSRRELVADIKPDPEIDAFMKATAVEGQETSLVTDYILKILGLEICADILVGDEMRRGISGGQKKRSTTESFILSVLINSNLCKLNGAGEMLVGPAKAFFMDEISTGLDSSTTFQIIKFMRQMVHIMDVTMIISLLQPAPETYNLFDDIILLSEGFKCPERKGVADFLQEVTSKKDQEQYWFRRDIPYQYISVPEFVAHFNNYCIGQQLHEEIQVPFDSNKTHPAALVKEKTEMKHGQLEDGGKYYGALFFSLINVMFNGVAELAMTINRLPVFFKQRDFLFYPSWAFALPIWVLRIPLSLLESGIWIILTYYTIGFAPSASRFFRQLLAFFCVHQMALSLFRFIAAIGRTKVVANTLGIFTILVVFVLSGFTISKDDIEPWMIWCYYASPMMYGQTAIAINEFLDKRWSAPNNDPRILEPTVGKAFLKARGIFTEDYWYWISVGALIGFSLLFNICFILALTYLNPFISSKSIIVEEEDSRKTMTASSSGKKLATENSEKNSASNAKRFEGIDLEVRNTTHSPITKAAEFSKSKKGMVLPFQPLSLAFENVNYYIDMPNEMKKQGIEENRLQLLKDISGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSINISGYPKNQSTFARISGYCEQNDIHSPNVTVYESLLFSAWLRLSKEVDKETRKMFIEEVIELVELHSVRNFIVGLPGIDGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEHFDELLLMKRGGQVIYGGPLGRNSEKLIEYFEAITGIPEIKDGYNPATWMLEITSPLVESQLDIDFAELYTKSDLYQKNQELIKELCTPVPGTKDLYFPSKYSQSFVTQCKACFWKQYCSYWRNPQYNAVRLFITIIIGIIFGLIYWNKGEKMQKEQDLLNLVGAMYLSVIFLGASNTSSVQPVVAIERTVLYRERAAGMYSELPYAIGQVAIEVIYVAIQSLAYSIILYWMIGLPSQVDNFLWFYYFIFMSFMYFTLYGMMTVALTPNHQIAAIVMSFFISFWNLFSGFLIPRTQIPIWWRWYYWASPVAWTIYGLVTSQVGDKNSPIEVPGFKPMTIKEYLEKRLGFQHDFLGVVALTHIAFSLLFLFVFAYGIRFLNFQKR 1428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi660g00026 1428 CDD ABCG_PDR_domain2 824 1062 IPR034003 -
Sebi660g00026 1428 Gene3D - 172 457 IPR027417 -
Sebi660g00026 1428 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 850 1063 IPR027417 -
Sebi660g00026 1428 FunFam ABC transporter G family member 34 170 474 - -
Sebi660g00026 1428 Pfam ABC-2 type transporter 1152 1364 IPR013525 GO:0016020|GO:0140359
Sebi660g00026 1428 Pfam ABC-2 type transporter 524 684 IPR013525 GO:0016020|GO:0140359
Sebi660g00026 1428 Pfam ABC transporter 183 346 IPR003439 GO:0005524
Sebi660g00026 1428 MobiDBLite consensus disorder prediction 766 785 - -
Sebi660g00026 1428 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 167 459 IPR003439 GO:0005524
Sebi660g00026 1428 Pfam ABC-2 type transporter 1036 1106 IPR043926 GO:0140359
Sebi660g00026 1428 Pfam Plant PDR ABC transporter associated 689 755 IPR013581 -
Sebi660g00026 1428 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 435 IPR027417 -
Sebi660g00026 1428 MobiDBLite consensus disorder prediction 767 785 - -
Sebi660g00026 1428 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 34 511 - -
Sebi660g00026 1428 Gene3D - 836 1075 IPR027417 -
Sebi660g00026 1428 FunFam ABC transporter G family member 40 841 1071 - -
Sebi660g00026 1428 SMART AAA_5 192 436 IPR003593 GO:0016887
Sebi660g00026 1428 SMART AAA_5 864 1056 IPR003593 GO:0016887
Sebi660g00026 1428 Pfam ABC-transporter N-terminal 107 157 IPR029481 -
Sebi660g00026 1428 Pfam ABC transporter 855 1006 IPR003439 GO:0005524
Sebi660g00026 1428 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 827 1079 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi660g00026 Sebi-Chr660 536200 545150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi660g00026 852 1039 Calmodulin-binding Proteins AT2G36910 27.228 3.47e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi660g00026 K08711 - gmx:100788067 2387.07