Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi660g00013 ATGGACAGTTTTGAAGAAGGCCCACTTGGCGGCCCACTGGGCCAACTCGATTGGGAAGCTTTCTTCGACAAGTTACCAGAATTCCAAGTCGATGATTTTTTGCAGGAGGATGAGTCTCCTGTTGCCGTCGCCGATGGTCCCTCGCCGAATCCCATTCTATCGGAAATCGAGAATTTGCTCATGGCCGACCTTCCCGCAACGCCTTCGTCGGAGTCCGACTACGACAAGCTTCTGGCGGAGATACTCATCGAGCCGCGCCCTGATTCCGAGGAAGGTTCGGTTCCTTCTGACAAAGAGAGAGTCGATCCAGTAACTCCCGAAGAGGCTGCTGATGAACCTATGTCCAAGAAGATTAAAAGGCAGATGAGAAACAGGGATGCTGCTGTGAGATCAAGAGAGAGGAAGAAGATGTATGTGAAAAACCTTGAGATGAAGAGTGGGTATTATGAAGGGGAATGCAAAAGACTGGCGCATTTGCTTCAGTGTTGCTATGCTGAGAACCACGCTTTGCGGCTTTGTTTGCAATCGCGTGGTGCATTTGGTGCTCCCGTGACCATGCAGGAGTCTGCTGTGCTCTTGTTGGTTGTTTGTGGAGTGGACTGGATGTTCATATCAACTTTAGGCGTTTTAATGGATTTTGTGGAACTAGAAATCCCTGCTGCTGGGTTCCCTGCTGTGGTTCACGGGCATCATGTGCCAACTCAGTCTACCCCTGATACTGTGGCTAACCGCAGTACTTCCAAGAGAAAACATGGAACAGAAAGGCCCAAGAAGGGTGGGTCGAAAAGGGCCAGAAAGTAA 801 0.5019 MDSFEEGPLGGPLGQLDWEAFFDKLPEFQVDDFLQEDESPVAVADGPSPNPILSEIENLLMADLPATPSSESDYDKLLAEILIEPRPDSEEGSVPSDKERVDPVTPEEAADEPMSKKIKRQMRNRDAAVRSRERKKMYVKNLEMKSGYYEGECKRLAHLLQCCYAENHALRLCLQSRGAFGAPVTMQESAVLLLVVCGVDWMFISTLGVLMDFVELEIPAAGFPAVVHGHHVPTQSTPDTVANRSTSKRKHGTERPKKGGSKRARK 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi660g00013 266 SMART brlzneu 112 176 IPR004827 GO:0003700|GO:0006355
Sebi660g00013 266 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 114 156 IPR004827 GO:0003700|GO:0006355
Sebi660g00013 266 MobiDBLite consensus disorder prediction 250 266 - -
Sebi660g00013 266 CDD bZIP_HY5-like 117 168 - -
Sebi660g00013 266 Gene3D - 115 176 - -
Sebi660g00013 266 MobiDBLite consensus disorder prediction 85 126 - -
Sebi660g00013 266 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 119 134 IPR004827 GO:0003700|GO:0006355
Sebi660g00013 266 SUPERFAMILY Leucine zipper domain 116 172 IPR046347 GO:0003700|GO:0006355
Sebi660g00013 266 Pfam bZIP transcription factor 115 159 IPR004827 GO:0003700|GO:0006355
Sebi660g00013 266 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 15 195 - -
Sebi660g00013 266 MobiDBLite consensus disorder prediction 231 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi660g00013 Sebi-Chr660 368756 370968 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi660g00013 22 191 bZIP Transcription Factor Family AT1G42990 32.212 8.37e-16 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sebi660g00013 bZIP_1 3.8e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi660g00013 - - ahf:112743660 230.72