Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi65g00126 ATGGAGAAGTCAGCAAGCCTGAACAGTTCAACTAACGCTTTAAGGGATGATCATGATATGATTGGGGTTCCTTTCATGGCATCTTGGCTACCATATCGGTCCTCAATCATAATTGCAGAAAAATTAATTTCAAGTTTTCAAACAGAGTTACCAAAGGAGGTGACTTTAAGAGATCCGGTTGGAAATGAATTTTCTGTTTCCATTGAGGAGTTATCCAACATGCACTGCTTCACAAAGGGTTTGCCACAGATGAGGGCTTTTTACCCTGTTCATTATCCAGTACACATGTGGTACAGATACGTTGGAAATGCTACATTCAGCTTTGAACTATGGCCTAAAGATGGAGAAGGCCAGATTGATTATCCTAATCCTGCTTTAAAAAAGGAAGATCATGAACAATGTGTCAACCAACCTGGGACAACATCAAACAGTGATCACGAAGATGTAAGTAGTGAAGCAGATGAAATCATGGGAGTTCGCAGTGAAGACCTATGGACGACCACACTTACTCAAGCACAGGTGGAAGGCAGGCGGGCAGTGGTTATATCGGCGAGGGTTGTGACCTCTTACTTCCACAACAGGCCAAACAACTTCCAAGTGAGATTACCAGATGACCATATCAAATCGTGGGAATTGATTTGGAATCGACGAATACCGACAGAGTGCAAAATTGGACATGGTTGGAGTGAATTTTGTACCACACATGGGCTGCAAAAAGGAGACCACATCAGGTTTTGGAAGTTGGAAAATGAAGCCTTCATCAGAATCGTTCGAACAAGATCCTCAACTTAG 792 0.4255 MEKSASLNSSTNALRDDHDMIGVPFMASWLPYRSSIIIAEKLISSFQTELPKEVTLRDPVGNEFSVSIEELSNMHCFTKGLPQMRAFYPVHYPVHMWYRYVGNATFSFELWPKDGEGQIDYPNPALKKEDHEQCVNQPGTTSNSDHEDVSSEADEIMGVRSEDLWTTTLTQAQVEGRRAVVISARVVTSYFHNRPNNFQVRLPDDHIKSWELIWNRRIPTECKIGHGWSEFCTTHGLQKGDHIRFWKLENEAFIRIVRTRSST 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi65g00126 263 SMART B3_2 165 260 IPR003340 GO:0003677
Sebi65g00126 263 Pfam B3 DNA binding domain 166 256 IPR003340 GO:0003677
Sebi65g00126 263 ProSiteProfiles B3 DNA-binding domain profile. 165 262 IPR003340 GO:0003677
Sebi65g00126 263 MobiDBLite consensus disorder prediction 131 151 - -
Sebi65g00126 263 CDD B3_DNA 166 251 IPR003340 GO:0003677
Sebi65g00126 263 SUPERFAMILY DNA-binding pseudobarrel domain 165 259 IPR015300 -
Sebi65g00126 263 Gene3D - 142 261 IPR015300 -
Sebi65g00126 263 PANTHER B3 DOMAIN-CONTAINING 40 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi65g00126 Sebi-Chr65 2255910 2257313 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Sebi65g00126 B3 6.2e-10 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi65g00126 - K12063 lja:Lj1g3v2095910.1 62.003