Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi65g00115 ATGAGAAATGCTGCTGAGACCCTAATACCAGTTACACTAGAGCTTGGGGGAAAAGATGCATTTATTGTTTGCAAAGACGTAGATGTGGACGATGTTGCACGAATTGCTGTCAGAGCTGCTCTCCAGTCTAGTGGACAGAACTGTGCTGGGGCTGAGTGA 159 0.4717 MRNAAETLIPVTLELGGKDAFIVCKDVDVDDVARIAVRAALQSSGQNCAGAE 52
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi65g00115 52 SUPERFAMILY ALDH-like 1 51 IPR016161 GO:0016491
Sebi65g00115 52 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 1 16 IPR016162 GO:0016491
Sebi65g00115 52 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 17 51 IPR016163 GO:0016620
Sebi65g00115 52 Pfam Aldehyde dehydrogenase family 1 50 IPR015590 GO:0016491
Sebi65g00115 52 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 51 - -
Sebi65g00115 52 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 41 52 IPR016160 GO:0016491
Sebi65g00115 52 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 13 20 IPR029510 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi65g00115 Sebi-Chr65 2180534 2180820 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi65g00115 1 52 Aldehyde Dehydrogenase Gene Family AT3G66658 80.769 7.64e-25 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi65g00115 - - qsu:111989014 86.2705