Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi65g00092 ATGACTCTCCAACTCCAATTCCCTTCCACCCAAACGGTGCTTTCCACCGCCGCCTCTTTCGCCGCCACCGCCATGCTCCTCCGCTCCCTCGCTCGAGACTACCTCCCCCGCGAGCTTCACTACTTCCTCCTCTCCAAATTCTCCCAATTCTTCACCACATTCTCCTCCCAATTCACCCTCGTCATCGACGAGTACGAAGCCCTCATCCACAACCACCTCTTCCATGCCGCCCAGCTTTACCTCAGACCCCAAATTTCCCCCAACACCAAGCGCTTCAGGGCCACCATTCCCCCCAAACAGAGCAAGATCTCAATCGTCATGGACCGCAACGAAGAAATCATCGACACCTTCAACGGTGTCCAATTCACGTGGAAATTGATCACCAGAAAGATCCCATCCAAGCACATTCAACCCGCAACTCCAAACGAGCACCAATTCACCTTGAAAACTGAGGTTCGCTTCTTCGAATTGCGGTTTCATAAGAAGCACAAGGACATGGCTCTAGCGGAATACTTGCCTCATGTTATGGAGAAGGCGAAGGAGGTGAGAGAAGAGCGAAAGACGCTGAAGCTTTTCACTCTGAATAACAACAAAGTGAGTAGGAGGCGAGGGGAGACATGGCAGTCTGTGAATCTTTATCATCCTGCTACATTTGACACGTTGGCGATGGATTTGAGGAGTGTTGGAAAGGCGTGGAAGAGAGGGTACTTGCTCTCTGGACCTCCAGGGACTGGAAAATCCAGCTTGATTGCTGCAATGGCAAATTATCTCAATTTTGATGTTTATGATTTGGAACTCACTGATCTTACGCGTAATTCATCTCTCAAGAAATTGATGATTGCAACTGGGAATCGCTCAATACTTGTGGTTGAGGACATTGATTGTTCCCTTGAACTGCACAATCGGAATCGGCTTGTAAGATCATCGAAACCTAGACCTCCTACCCCTTGGCCACATGAGGGTCCAAAGCCACAGGTGACTTTATCGGGATTCCTCAATTTCATAGATGGGTTGTGGTCTAGCTGTGGGGATGAGCGGATCATAGTGTTCACAACCAATCACAAAGACAAATTGGACCCTGCTCTGTTACGCCCTGGGCGTATGGATGTGCACATTGACATGTCTTACTGCACCCCATGTGGGTTCAAAATGCTGGCTTGGAATTACCATGGGATCAAAGAGCACCCACTTTTTGTTGAGGTTGAGAAGTTGCTAAAGACAATTAATGTCACTCCTGCTGAGGTGGGTGAGCATTTTTTGAAGAATGAGGATCCTGAAATTGCACTAACAAGCCTCATGGAGCTCCTTATTGAGAAGGGACGAAATCATGAATCTAAAGCTATCAAAGAAGATCTCACCACTAAATGA 1368 0.4803 MTLQLQFPSTQTVLSTAASFAATAMLLRSLARDYLPRELHYFLLSKFSQFFTTFSSQFTLVIDEYEALIHNHLFHAAQLYLRPQISPNTKRFRATIPPKQSKISIVMDRNEEIIDTFNGVQFTWKLITRKIPSKHIQPATPNEHQFTLKTEVRFFELRFHKKHKDMALAEYLPHVMEKAKEVREERKTLKLFTLNNNKVSRRRGETWQSVNLYHPATFDTLAMDLRSVGKAWKRGYLLSGPPGTGKSSLIAAMANYLNFDVYDLELTDLTRNSSLKKLMIATGNRSILVVEDIDCSLELHNRNRLVRSSKPRPPTPWPHEGPKPQVTLSGFLNFIDGLWSSCGDERIIVFTTNHKDKLDPALLRPGRMDVHIDMSYCTPCGFKMLAWNYHGIKEHPLFVEVEKLLKTINVTPAEVGEHFLKNEDPEIALTSLMELLIEKGRNHESKAIKEDLTTK 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi65g00092 455 Pfam Domain associated at C-terminal with AAA 35 127 IPR025753 -
Sebi65g00092 455 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 106 419 IPR027417 -
Sebi65g00092 455 Gene3D - 179 372 IPR027417 -
Sebi65g00092 455 PANTHER BCS1 AAA-TYPE ATPASE 15 439 - -
Sebi65g00092 455 ProSitePatterns AAA-protein family signature. 346 364 IPR003960 GO:0005524|GO:0016887
Sebi65g00092 455 SMART AAA_5 232 378 IPR003593 GO:0016887
Sebi65g00092 455 Gene3D - 373 440 - -
Sebi65g00092 455 Pfam ATPase family associated with various cellular activities (AAA) 237 375 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi65g00092 Sebi-Chr65 1991180 1993376 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi65g00092 234 374 Calmodulin-binding Proteins AT3G56690 27.152 3.84e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi65g00092 K08900 - gmx:100789716 606.29