Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi65g00082 ATGGAGGAAGACAAAGTTGATAGTATGGAAGGTACAATTGATAGCGATGAAGGCACAGATCGCTTTAATGAAGAGGATGATTTAGGCAATTATGGCTTTGAAGGCATTGAAATTGATGGTAGGGGTGACCTTACTGACCTTGATGCAGACCTGATAACCGATGAAGTTATGATGAAATTTCATTTCTCAAACATTGAGTGTGCATTTCAATTTTACAACTGGTTTGGAAAAAGGAGAGGTTTCTCTGCTAGGAGAGGTAAGGAACGCAAAGACAAGAATGAAGAAATAGTGGAGAAGACATTTTTTTGTCACAGGGAAGGAAAACGACGGAAAAGGAAATGTGTTAAGGGAGTGAGGAAGTCTAAGCCTGAGACGAGAAATGGTTGTCTTGCAAAATTGAAGATTCGAGTTCTCAAACAAACAGGTCGTTGGCACGTGACCTCTTTCTGTAATGAGCATAACCATCCATTGGTGCTGCCTAAATTTACAAAGGTGTTGCCTGCACACCGGAGAATGACTGATGCTGACATAATGCAAATGAACAACATGCGAAAGGCAGGAATTAGCACACCTCAAATTTATGGTTCATTTGCTAGTCAATGTGGTGGTTTTGAACATGTTGGTTTTAGCAAGCGGGACATGTATAATCAAATTGTGAAGCAAAGGTCATTTAGAGAATCTGATGTGAAGAGTGCCTTGCAGTATCTTCGAAAAATTGCTGAAATTGATGAAGCATTGGCATGTAGGCATACAGTGGATGAAAAAGGTAGACTCCAACGCCTTTTTTGGTGTGATGGGCATAGTCAGGTGGATTACAAATTGTTTGGTGATGTATTAGCATTTGATGCCACGTATCAAAGGAACAAATACCACTATCCGTTAGTGGTATTTTCGGGTATCAACCATCACAACCAGTCTATAATATTTGCTACTACGCTAGTTGGGGATGAGACAGAAGAAACCTATGTGTGGTTGCTTCAACAGTTTTTGGTGGTTATGAAAGGCAAGTGTCCTACAGCTGTAATAACTGATGGAGATGTTGCTATGAGGAATGCCATAAGGAGAGTTTTTCCGAATGCCTCTCATAGGTTGTGCGCGTGGCACCTTATACGTAATGCCACTAGCAATGTTAAAAACCCCAAAGTGGTAGCTGAGTTCAAGAGATGTATGTTGGGCGATTATGAGTTGCACCAGTTTCATCGTAAGTGGGAAACGATGGTAAGAGATTTTGGTCTTGAAGACAATTCTTGGGTGAAGGAGATTTTTGAGAAAAGGAGGATGTGGGCAACAGCGTATATGAGGGCTAGATTCTTTGGTGGGTTTAGGATGACCTCTAGATGTGAGGGTTTGCATTCTCATATTGGTAAGTTTGTGCACTCTCGACATGATTTGGCAGATTTTTTGGAGAATTTTCGCCATTGTCTAGATGCATTTCGATATAGGGAATTAGAGGCTGACTTTGCCTCAGTTAATGGTGAACCAATTATGCAAACCAATATTAAAGTATTGGAGAAGTCTGCATGTAGGAGCTTTACTTGGGAGGTGTTCACTTTATTTCTACCAGCTCTTGCTAGGGGCAGCACGGTGAGGGTGAAGAGTTCCACTACATTGATGTCTCAGACAATATTCACTGTGACCAAGTATGGGAGGGCAGGTAATGAGTGGCATGTGTCTTGGATGCCTAATCCATTTCAAATTAGATGTTCATGTAAGAGGATGGAGTCTTTTGGTCTTCCATGTGACCACATTGTTGGTGTTCTTGTCCATTTAAACATTGAGGAAATGCCAAAATGTCTAGTACTAGATAGGTGGACAATGGGTATCAAGGAAAAGATACACGAGTGTAATGTTGATCAAAACACTGTGTGGGACTCTGTATATTTGGCTAGGTGTGGTGCATTGGATTGGTTATGTCGACTAATGACTAGAAAATGTGCCAGGTCAACTATGAAATATAATGTTACAAGAGATTTAGTTACAAGGCATTTACAATGGTTAGGGGAAAGTGATGAAGGTATTGGTGATGAGAATGAAAAACCTGAAGAACGTGAGATTATTAGGGACCCGGTGAGAGTTGGGAGTAAGGGTTGTGCTGCTACTTCAACATCTCAACCTTTGAAATCAAGGAAGCGTCAGCGGTGCAGGTTATGTGGAGAGGTAGGCCATAATCGAACCACATGCTCTACTATAAGAAGACAGTATGAACATGTGTTATCTCAACAAGAGCCATTTGATGAAGCTGTAAGTTTAGCAGAGGATTGTTTATCATTTTAA 2274 0.409 MEEDKVDSMEGTIDSDEGTDRFNEEDDLGNYGFEGIEIDGRGDLTDLDADLITDEVMMKFHFSNIECAFQFYNWFGKRRGFSARRGKERKDKNEEIVEKTFFCHREGKRRKRKCVKGVRKSKPETRNGCLAKLKIRVLKQTGRWHVTSFCNEHNHPLVLPKFTKVLPAHRRMTDADIMQMNNMRKAGISTPQIYGSFASQCGGFEHVGFSKRDMYNQIVKQRSFRESDVKSALQYLRKIAEIDEALACRHTVDEKGRLQRLFWCDGHSQVDYKLFGDVLAFDATYQRNKYHYPLVVFSGINHHNQSIIFATTLVGDETEETYVWLLQQFLVVMKGKCPTAVITDGDVAMRNAIRRVFPNASHRLCAWHLIRNATSNVKNPKVVAEFKRCMLGDYELHQFHRKWETMVRDFGLEDNSWVKEIFEKRRMWATAYMRARFFGGFRMTSRCEGLHSHIGKFVHSRHDLADFLENFRHCLDAFRYRELEADFASVNGEPIMQTNIKVLEKSACRSFTWEVFTLFLPALARGSTVRVKSSTTLMSQTIFTVTKYGRAGNEWHVSWMPNPFQIRCSCKRMESFGLPCDHIVGVLVHLNIEEMPKCLVLDRWTMGIKEKIHECNVDQNTVWDSVYLARCGALDWLCRLMTRKCARSTMKYNVTRDLVTRHLQWLGESDEGIGDENEKPEEREIIRDPVRVGSKGCAATSTSQPLKSRKRQRCRLCGEVGHNRTTCSTIRRQYEHVLSQQEPFDEAVSLAEDCLSF 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi65g00082 757 MobiDBLite consensus disorder prediction 11 25 - -
Sebi65g00082 757 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 58 656 IPR031052 GO:0006355
Sebi65g00082 757 ProSiteProfiles Zinc finger SWIM-type profile. 543 591 IPR007527 GO:0008270
Sebi65g00082 757 SMART 26again6 566 593 IPR006564 GO:0008270
Sebi65g00082 757 Pfam FAR1 DNA-binding domain 70 158 IPR004330 -
Sebi65g00082 757 Pfam MULE transposase domain 278 372 IPR018289 -
Sebi65g00082 757 MobiDBLite consensus disorder prediction 1 25 - -
Sebi65g00082 757 Pfam SWIM zinc finger 557 591 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi65g00082 Sebi-Chr65 1849009 1851282 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi65g00082 MULE 3.3e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi65g00082 - - tpra:123913749 700.279