Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi65g00077 ATGAAGGACGCAGATGTGTCAAGGCAGATCCAGCAGATGATTAGGTTCATCCGCCAAGAGGCTGAGGAGAAAGCTAATGAAATTTCTGTTGCCGCAGAGGAGGAATTCAATATTGAGAAACTACAATTACTTGAAGCTGAAAAGAGAAAGATAAGACAAGAGTACGAACGAAAAGCCAAACAAATTGACATTCGTAGAAAGATTGAATACTCCATGCAGCTGAATGCAGCAAGAATAAAGGTACTCCAAGCACAAGATGAGGCGGTGAATTCTATGAAGGATGCTGCTAAAAAGGCTCTTTTACGTGTCTCAAATGATAAGAAATTATACAAGAAACTCCTCAAAGACATGATTGTTCAGGTAGCTGAAGTGAATGTGCACAACATGTTGCAGGGTTTACTACGCCTGAGGGAACCATCTGTGCTACTAAGATGCAGAGAGGGTGACCGTAAGCTAGTTGAGTCATTGCTAGAGGAAGCCAAAAAAGAATACACAGAAAAAGCCAAAATGCAAGCACCTAAGATTATCCTTGATGATCGTGTTTACCTCCCACCACCTCCTAAAAACGGTGCTGTGGATTCCCATGAACAATTCTGCTCTGGAGGAGTGGTATTGGCCTCGGAGGATGGGAAGATAGTGTTGGAGAACACCCTTGATGCAAGGCTTGATGTTATCTTCCGGCAGAAACTACCTGAGGCATGTTCATTCACCCACACTCCTTCCATTCATTTCAACATTTTACCTTGGTACTGCAAATGGTTATTTATCGTTGTTACTCAATTAAAACGTCCTTGGCTTGCAGACACAAGGAGAAGAATGGAAGCTGTTTTCATCACCAAACCATCTTCTCACTTCAAAATCAAACTCCCTCCCAATCCCAAACTAACATTCCCTTCAGGTCACCAATCGCTCCCTCTTCGTCACAAACCCACCCACTTTCTCACCGTCTCCGCCGCACTCCAAAACCAGCAACAACAGCAAGCGGCACCCAAAGACAGCAGCAGCGAAGATGAGTCCTACGGCGAAGTCAAAAAAATCATCGGCAGCAATGCCCTCGACGGCGCCGCCGGCATGGAATACCTCATCGAATGGAAAGACGATCATGCTCCTTCTTGGGTTCCCGCCGATTTCATAGCCAAAGACGTCATCGCCGAGTACGAAACTCCCTGGTGGACCGCCGCCAAGAAAGCCGATGAATCCGCCCTCAAGAACCTCGTCGACGCCGATGACGGCCGCGACATCGACGCTGTGGACGCCGACGGCCGAACCGCGCTCCTCTTCGTCGCTGGACTCGGTTCGGAGCCCTGCGTCCGGATTCTAGCCGAAGCCGGCGCGAATCTGGACCACCGTGACAACGCCGGCGGCCTGACGGCGCTGCACATGGCGGCGGGGTACGTGAGGCCTGGCGTGGCGAAGCTGCTTCTGGAGCTCGGAGCGGAACCTGAGGTAGAAGATGATCGTGGAAGGACGGCGCTGGATCTGGCAAGGGAGATTCTGAAGGCGACGCCGAAGGGGAACCCGATGCAATTCGGGCGACGAGTGGGGTTGGAGGGTGTGATTAGGGTTTTGGAAGGTGCGATATTCGAGTACGCAGAAGTGGAAGAGATTTTGGAAGAGAGGGGGAAGGGTGAGAATTTGGAGTACCTTGTGCGGTGGAAGGATGGTGGTGCAAACGAGTGGGTGAAGGCGAAGTTTGTGGCGGAGGATTTGGTGAAGAAGTACGAGGCTGGGGCTTGA 1737 0.506 MKDADVSRQIQQMIRFIRQEAEEKANEISVAAEEEFNIEKLQLLEAEKRKIRQEYERKAKQIDIRRKIEYSMQLNAARIKVLQAQDEAVNSMKDAAKKALLRVSNDKKLYKKLLKDMIVQVAEVNVHNMLQGLLRLREPSVLLRCREGDRKLVESLLEEAKKEYTEKAKMQAPKIILDDRVYLPPPPKNGAVDSHEQFCSGGVVLASEDGKIVLENTLDARLDVIFRQKLPEACSFTHTPSIHFNILPWYCKWLFIVVTQLKRPWLADTRRRMEAVFITKPSSHFKIKLPPNPKLTFPSGHQSLPLRHKPTHFLTVSAALQNQQQQQAAPKDSSSEDESYGEVKKIIGSNALDGAAGMEYLIEWKDDHAPSWVPADFIAKDVIAEYETPWWTAAKKADESALKNLVDADDGRDIDAVDADGRTALLFVAGLGSEPCVRILAEAGANLDHRDNAGGLTALHMAAGYVRPGVAKLLLELGAEPEVEDDRGRTALDLAREILKATPKGNPMQFGRRVGLEGVIRVLEGAIFEYAEVEEILEERGKGENLEYLVRWKDGGANEWVKAKFVAEDLVKKYEAGA 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi65g00077 578 SUPERFAMILY Chromo domain-like 529 576 IPR016197 -
Sebi65g00077 578 Gene3D - 527 577 - -
Sebi65g00077 578 Gene3D - 336 384 - -
Sebi65g00077 578 Pfam ATP synthase (E/31 kDa) subunit 16 232 IPR002842 GO:0033178|GO:0046961|GO:1902600
Sebi65g00077 578 Gene3D - 1 62 - -
Sebi65g00077 578 Coils Coil 38 61 - -
Sebi65g00077 578 ProSiteProfiles Ankyrin repeat region circular profile. 454 486 - -
Sebi65g00077 578 SMART chromo_7 339 391 IPR000953 -
Sebi65g00077 578 SMART chromo_7 529 575 IPR000953 -
Sebi65g00077 578 ProSiteProfiles Ankyrin repeat region circular profile. 420 452 - -
Sebi65g00077 578 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 233 IPR002842 GO:0033178|GO:0046961|GO:1902600
Sebi65g00077 578 Pfam Ankyrin repeats (many copies) 440 495 IPR002110 GO:0005515
Sebi65g00077 578 Hamap V-type proton ATPase subunit E [atpE]. 8 239 IPR002842 GO:0033178|GO:0046961|GO:1902600
Sebi65g00077 578 ProSiteProfiles Ankyrin repeat profile. 420 452 IPR002110 GO:0005515
Sebi65g00077 578 SUPERFAMILY V-type ATPase subunit E-like 87 233 - -
Sebi65g00077 578 ProSiteProfiles Ankyrin repeat profile. 454 486 IPR002110 GO:0005515
Sebi65g00077 578 CDD CD2_cpSRP43_like 529 576 - -
Sebi65g00077 578 SUPERFAMILY Ankyrin repeat 379 497 IPR036770 -
Sebi65g00077 578 Gene3D - 385 526 IPR036770 -
Sebi65g00077 578 SMART ANK_2a 420 449 IPR002110 GO:0005515
Sebi65g00077 578 SMART ANK_2a 454 483 IPR002110 GO:0005515
Sebi65g00077 578 SMART ANK_2a 385 416 IPR002110 GO:0005515
Sebi65g00077 578 Coils Coil 14 34 - -
Sebi65g00077 578 SUPERFAMILY Chromo domain-like 337 390 IPR016197 -
Sebi65g00077 578 Gene3D - 92 239 IPR038495 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi65g00077 Sebi-Chr65 1742778 1745734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi65g00077 1 231 Primary Pumps ATPases(2) AT4G11150 68.831 6.40e-103 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi65g00077 K12271 - gmx:100818382 484.182