Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi65g00071 ATGAAACAGAGAATTGATGCTCTGCCTTTTCCCGAGCAACTACTATCCAGTAAACCAGTGATATACCAAAGCACAGTACAAAAGGTTCCACTGTGCTCTTCATTCAGTGATTTGGAAGCGCTGCTAAAGCTGAAGGATTCCATGAAGGGAAAGGAAGCCAAAGACGATGCACTGCAAGACTGGAAGTTTTCCGCGTCACTTTCGGCACACTGTTCATTTTCTGGGGTAACATGTGACCAAAACCTGCGTGTGATTGCTCTCAACGTGACAGGCGTTCCTCTCTTCGGGACCCTTCCGCGGGAGATTGGAATGCTTGACAAGCTGGAGAATCTCACCATCTCCATGGACAACCTCACCGGCACTCTCCCTATGGAGCTTTCCAACCTCACTTCTCTTAAGATCCTCAACGTCTCTCATAACGGCTTCTCCGGCAACTTTCCCGGCAACATCACCTTCCGCATGACCAAACTGGAGGTCCTCGACGCCTACGACAACAACTTCAACGGATCACTTCCGGAGGAAATTGTCAAACTCACGGAACTCAAGTACCTCCACCTCGGCGGGAACTATTTTTCCGGCACGATACCGGAGAGTTACACCGAGTTTCAGAGCTTGGAGTATTTGTGCTTGAACGCAAACAGCTTAACTGGCAAGATTCCCAAGAGCTTAGCCAAGTTGAAGATGTTGAAGGAACTGTTTCTCGGCTACACCAATGCTTTCGATGGAATTCCACCGGAGCTTGGTTCCATTGAATCTCTGCGACTGCTTGACTTGTCTAGCTCCGGCCTCAGCGGAGAGATTCCACCGAGCTTAGGCAATTTGACAAACCTTCATTCCTTGTTCTTGCAAATGAACAACCTCTCTGGAACACTTCCGCCGCAGCTATCTTCCATGATGAGTCTCATGTCGCTGGACCTCTCCTACAACAACCTCACCGGAGAGATTCCGGAGAGTTTCTCCCAGCTTAAAAACCTCACTCTCATGAACTTCTTCAAGAACAACTTCCGCGGCCCCATCCCCTCCTTCGTCGGAGACCTTCCCAATCTGGAAACGCTTCAGCTTTGGGAGAACAACTTCTCCTTCGTGCTGCCTCAGAATTTGGGTCAAAATGGGAAGTTCAAGTACTTCGACGTGACGAAAAACCATCTCACAGGATTGATCCCTCCGGATTTGTGCAAAGGAGGGAGGTTGCAAACGTTCATTATCACCGATAACTTCTTCGACGGTCCAATCCCAAACGGAATCGGCGAGTGCAAGTCACTCACCAAGATCCGAGTCGCCAATAACTACCTGGACGGGCCGGTTCCCCCGGGGATTTTCAAACTACCTTTAGTTACAATAATGGAACTGAATAATAACCGCTTTAACGGCCAACTGCCTTCCGTGATTTCCGGCGATTCTCTCGGTACGCTCACGCTTTCCAACAACTTATTCACCGGGAGAATTCCTCCTGAGTTGAAAAACCTCAGAGCGTTACAGGCTTTGTTGCTGAACGCCAATGAGTTCGTTGGCGAAATCCCAGGGGAAGTTTTTGAAATACCAAGGCTGACGAAGGTTAACATAAGCGGCAACAACCTCACCGGTCCAATCCCAACGACGATTACTCACTGCGTTTCACTGACTGCCGTTGACCTGAGCCGGAACATGCTGGACGGCGAGGTTCCGAAGGGGATGAAGCTCCTGAAAGACTTAAGCATTTTGAATCTGTCTCGTAACCATATATCTGGTCCAGTTCCCGACGAGATTCGATTCATGACGAGTCTCACCACTCTGGATCTCTCCAACAACAATTTCACCGGCAGTATCCCCACCGGGGGTCAGTTTTTGGTCTTCAACGACAAGTCGTTTTATGGGAACCCCAACCTCTGTTTCCCTCACCAGACCTCTTGCCCTTCCTTGCTCTACCTATCAACGAAAAGCCATAGCAAAACGGCGAGGGTGAAAGCCGTCGTGATCGGGATTGCACTCGCCACCGCGGTCTTGCTGGTGCTGGTGACGTTGCACGTGACGAGGAAGAGGAAGCTGCACAGATCAAAGGCGTGGAAGCTGACAACGTTTCAGAGGCTAGACTTCAAAGCGGAGGACGTGGTGGAGTGCCTGAAGGAAGAGAACATAATAGGGAAAGGAGGAGCAGGGATCGTGTACAGAGGGTCCATGCCAAACGAAACGGACATAGCAATAAAGCGTTTGGTTGGGCAAGGAAGTGGGAGAAACGATTACGGGTTCAAAGCGGAGATAGAGACGCTGGGGAAGATAAGACACAGGAACATAATGAGGCTTCTGGGGTATGTTTCAAACAAGGACACTAACTTGTTGCTGTATGAGTACATGCCAAATGGGAGCTTAGGGGAATGGCTGCATGGGTCGAAGGGTGGGCACTTGAGGTGGGAGATGAGGGATGTCAAGTCCAATAACATATTGCTAGATGCAGACTTTGAGGCCCATGTCGCCGATTTTGGACTTGCCAAGTTCTTGTACGACCCAGGAGCCTCTCAGTCTATGTCCTCCATCGCTGGCTCCTACGGCTACATTGCTCCAGAGTATGCTTACACGCTGAAAGTGGACGAGAAAAGTGATGTGTATAGCTTTGGCGTAGTGCTGTTGGAGCTGATCGTAGGAAGAAAGCCAGTGGGTGAGTTTGGAGATGGCGTGGACATTGTTGGATGGGTGAATCAAACGAGATTAGAACTCTCTCAGCCGTCGGATGCGGCATTGGTGTTAGCAGTGGTGGACCCACGCCTTACAGAGTATCCTTTGACAAGTGTCATCCACATGTTCAATATAGCTATGATGTGTGTTAAAGAAATGGGGCCCTCAAGGCCTACCATGAGGGAAGTTGTTCATATGCTCACCAATCCTCCTCCACAGTCTACCACTCATCACAACCTAATTAATCTCTAG 2901 0.4967 MKQRIDALPFPEQLLSSKPVIYQSTVQKVPLCSSFSDLEALLKLKDSMKGKEAKDDALQDWKFSASLSAHCSFSGVTCDQNLRVIALNVTGVPLFGTLPREIGMLDKLENLTISMDNLTGTLPMELSNLTSLKILNVSHNGFSGNFPGNITFRMTKLEVLDAYDNNFNGSLPEEIVKLTELKYLHLGGNYFSGTIPESYTEFQSLEYLCLNANSLTGKIPKSLAKLKMLKELFLGYTNAFDGIPPELGSIESLRLLDLSSSGLSGEIPPSLGNLTNLHSLFLQMNNLSGTLPPQLSSMMSLMSLDLSYNNLTGEIPESFSQLKNLTLMNFFKNNFRGPIPSFVGDLPNLETLQLWENNFSFVLPQNLGQNGKFKYFDVTKNHLTGLIPPDLCKGGRLQTFIITDNFFDGPIPNGIGECKSLTKIRVANNYLDGPVPPGIFKLPLVTIMELNNNRFNGQLPSVISGDSLGTLTLSNNLFTGRIPPELKNLRALQALLLNANEFVGEIPGEVFEIPRLTKVNISGNNLTGPIPTTITHCVSLTAVDLSRNMLDGEVPKGMKLLKDLSILNLSRNHISGPVPDEIRFMTSLTTLDLSNNNFTGSIPTGGQFLVFNDKSFYGNPNLCFPHQTSCPSLLYLSTKSHSKTARVKAVVIGIALATAVLLVLVTLHVTRKRKLHRSKAWKLTTFQRLDFKAEDVVECLKEENIIGKGGAGIVYRGSMPNETDIAIKRLVGQGSGRNDYGFKAEIETLGKIRHRNIMRLLGYVSNKDTNLLLYEYMPNGSLGEWLHGSKGGHLRWEMRDVKSNNILLDADFEAHVADFGLAKFLYDPGASQSMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIVGRKPVGEFGDGVDIVGWVNQTRLELSQPSDAALVLAVVDPRLTEYPLTSVIHMFNIAMMCVKEMGPSRPTMREVVHMLTNPPPQSTTHHNLINL 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi65g00071 966 Pfam Protein tyrosine and serine/threonine kinase 799 950 IPR001245 GO:0004672|GO:0006468
Sebi65g00071 966 Pfam Protein tyrosine and serine/threonine kinase 701 792 IPR001245 GO:0004672|GO:0006468
Sebi65g00071 966 Gene3D Ribonuclease Inhibitor 36 152 IPR032675 -
Sebi65g00071 966 SUPERFAMILY L domain-like 344 641 - -
Sebi65g00071 966 Gene3D Ribonuclease Inhibitor 242 337 IPR032675 -
Sebi65g00071 966 FunFam Leucine-rich receptor-like protein kinase family protein 243 340 - -
Sebi65g00071 966 Pfam Leucine Rich Repeat 301 322 IPR001611 GO:0005515
Sebi65g00071 966 Gene3D Transferase(Phosphotransferase) domain 1 777 962 - -
Sebi65g00071 966 Pfam Leucine rich repeat N-terminal domain 36 79 IPR013210 -
Sebi65g00071 966 ProSiteProfiles Protein kinase domain profile. 700 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi65g00071 966 Gene3D Phosphorylase Kinase; domain 1 665 776 - -
Sebi65g00071 966 SMART LRR_typ_2 154 178 IPR003591 -
Sebi65g00071 966 SMART LRR_typ_2 585 608 IPR003591 -
Sebi65g00071 966 SMART LRR_typ_2 346 370 IPR003591 -
Sebi65g00071 966 SMART LRR_typ_2 274 298 IPR003591 -
Sebi65g00071 966 SMART LRR_typ_2 489 513 IPR003591 -
Sebi65g00071 966 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 669 776 - -
Sebi65g00071 966 SUPERFAMILY RNI-like 87 408 - -
Sebi65g00071 966 SUPERFAMILY Protein kinase-like (PK-like) 688 950 IPR011009 -
Sebi65g00071 966 FunFam LRR receptor-like serine/threonine-protein kinase EFR 341 633 - -
Sebi65g00071 966 Gene3D Ribonuclease Inhibitor 341 633 IPR032675 -
Sebi65g00071 966 Gene3D Ribonuclease Inhibitor 153 241 IPR032675 -
Sebi65g00071 966 Pfam Leucine rich repeat 180 237 IPR001611 GO:0005515
Sebi65g00071 966 Pfam Leucine Rich repeat 586 600 IPR001611 GO:0005515
Sebi65g00071 966 FunFam Leucine-rich repeat receptor-like protein kinase 35 197 - -
Sebi65g00071 966 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 210 951 - -
Sebi65g00071 966 SMART serkin_6 700 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi65g00071 Sebi-Chr65 1669399 1672982 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi65g00071 32 954 Receptor kinase-like Gene Family AT1G75820 60.441 0.0 1165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sebi65g00071 PK_Tyr_Ser-Thr 1.9e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi65g00071 - - lja:Lj3g3v3375770.1 1515.75