Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi65g00051 ATGCCAAAAAGAGCAAACACCAGTGAGAGAAAGTTTCTTGGGGTGAGACAAAGGCCTTCAGGAAGATGGGTTGCTGAGATCAAGGACTCTTCACAGAAACTAAGGCTATGGTTAGGAACTTTTGACAGAGCAGAAGAAGCTGCCATGGCTTATGACTCTGCTGCAAGGCTTCTTAGAGGTAGAAATGCCAAGACAAACTTTCCAAACCCAACAGGAACCATGAACACACATGATGAAAGCATCAATTTTTTGGGAAAGAATCCAAGGGCTTACCAACTTCTTAAGCATGCAGTCATGAAGAACCATACAGTTTCCACAATCATGCCTTGGAAAAATCAGATCATGAGAGGGGATTTTGATACCCTTGTTGAGGAAACCATAGTTTGCTCCTCCAGTTCTGAAGAAGGTTCAAGTTTCTGTGGACTTTCAATTGGAAGTTGTAAGGTTTATTCTTCTATTATTGTTGCTCCTTCTTTCAGTGCTTCTTCCCCTTCTTGTCAAACAGGATCATAA 513 0.4172 MPKRANTSERKFLGVRQRPSGRWVAEIKDSSQKLRLWLGTFDRAEEAAMAYDSAARLLRGRNAKTNFPNPTGTMNTHDESINFLGKNPRAYQLLKHAVMKNHTVSTIMPWKNQIMRGDFDTLVEETIVCSSSSEEGSSFCGLSIGSCKVYSSIIVAPSFSASSPSCQTGS 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi65g00051 170 PRINTS Ethylene responsive element binding protein signature 12 23 IPR001471 GO:0003700|GO:0006355
Sebi65g00051 170 PRINTS Ethylene responsive element binding protein signature 34 50 IPR001471 GO:0003700|GO:0006355
Sebi65g00051 170 SUPERFAMILY DNA-binding domain 11 69 IPR016177 GO:0003677
Sebi65g00051 170 Gene3D AP2/ERF domain 10 69 IPR036955 GO:0003700|GO:0006355
Sebi65g00051 170 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 10 86 - -
Sebi65g00051 170 SMART rav1_2 11 74 IPR001471 GO:0003700|GO:0006355
Sebi65g00051 170 ProSiteProfiles AP2/ERF domain profile. 11 68 IPR001471 GO:0003700|GO:0006355
Sebi65g00051 170 CDD AP2 11 69 IPR001471 GO:0003700|GO:0006355
Sebi65g00051 170 Pfam AP2 domain 12 60 IPR001471 GO:0003700|GO:0006355
Sebi65g00051 170 FunFam ethylene-responsive transcription factor RAP2-11 10 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi65g00051 Sebi-Chr65 1412843 1413355 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi65g00051 3 69 AP2-EREBP Transcription Factor Family AT5G19790 65.672 7.13e-27 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sebi65g00051 AP2 5.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi65g00051 K09286 - gmx:100807374 245.743