Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi65g00043 ATGAACAACCACCCTGCAGGAGATGAAAGGGATCATCATCAGTACAGTCAGAAGAAGAGGAAATCAACAAGCTCTGAATCCATGAGGAGTAACAATTCAAGGAGAAGATTCTGCAGCAACAAAAATCATGATCAGGAAGTTAAAGGATCAGGAGTCTCCACCACACTGAAGCTTTATGATGACCCTTGGAAGATCAAGAAGACTCTAACTGACAGTGATCTTGGAATCTTGAGCAGACTCTTGTTGGCTGCAGATGTGGTGAAGAAACAGGTTTTGCCTATGTTGGGTGTTGATCATGCAAGAGCTGCTGAGACTGAGGAAGGTTCCCCAGTTAGAGTTTGGGACATGGACACCAAAACCATGCACCAACTCGTTCTCAAGCGATGGTCTTCATCTAAAAGCTATGTTCTTATTGGAAAGTGGAACCAAGATTTTGTCAGAAGAAGAGAGCTTAAGAAAGGGGATGAGATTGGATTCCACTGGGATCCTTATAACTGTGCTTTCAACTTCTGTGTTCTAAAACGGGCTATGCCGCTCAATTAG 543 0.4346 MNNHPAGDERDHHQYSQKKRKSTSSESMRSNNSRRRFCSNKNHDQEVKGSGVSTTLKLYDDPWKIKKTLTDSDLGILSRLLLAADVVKKQVLPMLGVDHARAAETEEGSPVRVWDMDTKTMHQLVLKRWSSSKSYVLIGKWNQDFVRRRELKKGDEIGFHWDPYNCAFNFCVLKRAMPLN 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi65g00043 180 MobiDBLite consensus disorder prediction 1 25 - -
Sebi65g00043 180 CDD B3_DNA 63 174 IPR003340 GO:0003677
Sebi65g00043 180 Gene3D - 62 176 IPR015300 -
Sebi65g00043 180 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 22 175 - -
Sebi65g00043 180 MobiDBLite consensus disorder prediction 1 51 - -
Sebi65g00043 180 SUPERFAMILY DNA-binding pseudobarrel domain 61 172 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi65g00043 Sebi-Chr65 1236747 1237289 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi65g00043 65 160 RAV Transcription Factor Family AT1G50680 33.981 1.29e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi65g00043 - - gmx:102670334 273.092