Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi65g00001 ATGGTCAGGGTTCAGAAATCCAAGAATTGTGAGAGTATCACGTTCTTTGGAGGAAAAGATAGACATAGCAAGGTTTGCACCATAAGAGGATTAAGGGACAGAAGGATTAGGCTCTCTGTACCAACAGCAATTCAGTTATATGATCTTCAAGACAAGCTTGGACTCAGCCAACCAAGCAAGGTGATAGATTGGTTGCTTGAAGCTACTAAATTAGACATTGATAAGCTTCCTCCACTTCAATTCCCTCAGGGCTTTTCTCAATTTCATCATCACCATCCACAAACCCTACTTCCTTTCCATGATTCAAGTGCTTCCTCTGAGCTCTCACTTGGACCTTTCTATGATGCTAATTCCACTCTCTTAAGGGATGGTGGAATTCAAAACCTCATGGAAAAATCAAGGTTTTGGGACATGGACTCATTATCAAGAGTTAAAGGCAAGGAATTAGCTGAAAGAGGGTACAATATCACAGATAAAGGAAAGTGGATCAAAACAAATGAGCAAGAAAATCAAGAAGGAGTGGTAGTTGGAAATGCAAATTACAACAACTTGCAGAAGCTTTTCCCTATGAGTACTCATCACTCTCCTTTACCTGCTGATCATCCCCATCAAAGCAATGGTGTGCAATTTCCATCTTCTTTGAATGTACCTTCTTCAGCTGGTAATTCCCAATTATTGTTTGGTCCATCATCTGCTGCTACACCATCACTTTTCACTCCTTTTATGACAGAAAATGATCCAAGTCAAAGACAATTCAATAGCCATATCCATCAGTTTCTAAACTCATCATCAGGTTCTTCACAACTATTGCCTCATCCTCTCATTCCATCTCTTCACTCATTCAATTCAACTGCAATCAGACCCTTTCCATCACCATTTAGTTCCAAGCTTATGGATTCTGATAACAATAACCGTAATAGCCAACCAGATAAGGGTAGTGATGCTCGTTCTAGATCTTGA 960 0.399 MVRVQKSKNCESITFFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLGLSQPSKVIDWLLEATKLDIDKLPPLQFPQGFSQFHHHHPQTLLPFHDSSASSELSLGPFYDANSTLLRDGGIQNLMEKSRFWDMDSLSRVKGKELAERGYNITDKGKWIKTNEQENQEGVVVGNANYNNLQKLFPMSTHHSPLPADHPHQSNGVQFPSSLNVPSSAGNSQLLFGPSSAATPSLFTPFMTENDPSQRQFNSHIHQFLNSSSGSSQLLPHPLIPSLHSFNSTAIRPFPSPFSSKLMDSDNNNRNSQPDKGSDARSRS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi65g00001 319 Pfam TCP family transcription factor 18 122 IPR017887 -
Sebi65g00001 319 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 8 272 IPR005333 GO:0003700
Sebi65g00001 319 ProSiteProfiles TCP domain profile. 18 76 IPR017887 -
Sebi65g00001 319 MobiDBLite consensus disorder prediction 291 319 - -
Sebi65g00001 319 MobiDBLite consensus disorder prediction 291 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi65g00001 Sebi-Chr65 81 1142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi65g00001 1 310 TCP Transcription Factor Family AT5G60970 39.296 8.61e-48 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Sebi65g00001 TCP 3.5e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi65g00001 - - gmx:100804574 348.591