Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi659g00030 ATGAAGAAGGGGAAGAATTCTGGTAGATGTAGCGGGAGAGAAGCTGCAGAAGCAATGGCAAAGGAAGCTAAAAAGAATCACTCCATGCTGCATAGCTCAGGCACTGTTAATGTTGATGGTTCAAACAATTTTGCCTCAGTTTTCTCCAAAAGAGGCAAGAAAGGAGTGAATCAGGATTGCTGCGTAGTGTGGGAAGAATTTGGATGCCAAGAGGACATGATCTTCTGTGGGATTTTTGATGGACATGGACCATGGGGTCACTTTGTGGCCAGAAGAGTAAGAGAATCATTGCCACCCTCTTTGCTATGCAACTGGCAAGAGACTCTTTCCCAAAATTCACTTGATCCTGATATTGATATAGAGACAGAGAAAAAGCATCACCGGTTTAATATATGGAAGCATTCCTACTTGAAGACTTGTGCTGTCATTGATCAAGAACTACAACAGAATCGCAAGATAGATTCATTTTTCAGTGGAACAACTGCCCTATCAATTGTTAGACAGGGTGAACTCATTGTGATTGCAAATGTTGGTGACTCTCGTGCTGTATTAGCCACAACATCAGATGATGGAAATTTGGTATCAGTTCAGCTGACAGTAGATTTCAAGCCCAATTTACCACAGGAGGCAGAGCGAATACTTGAGTGTCAAGGGAGGGTGTTCTGCTTACACGATGAGCCAGGAGTGCACAGGGTTTGGTTGCCAGATGAGGAGTCCCCAGGATTGGCCATGTCTAGAGCTTTTGGTGACTATTGTGTGAAAGAATATGGTCTTATTTCAGTGCCTGAGGTAACACAAAGGAATATAACCAATAGAGACCAGTTTGTTGTGCTAGCCACTGATGGGGTGTGGGATGTAATCTCGAATCAAGAAGCGGTGGATATTGTGTCTTCAACAGCAGACAGAACAAATTCAGCTAAACGTTTGGTGGAGTGTGCAATGCATGCATGGAAACGCAAGAGGCGAGGTATTGCCATGGATGACATTTCAGCTATTTGTCTCTTTTTTCACTCATCTTCACCTGAGCAAGTTGTTGCTACCCTAAAATAG 1050 0.4343 MKKGKNSGRCSGREAAEAMAKEAKKNHSMLHSSGTVNVDGSNNFASVFSKRGKKGVNQDCCVVWEEFGCQEDMIFCGIFDGHGPWGHFVARRVRESLPPSLLCNWQETLSQNSLDPDIDIETEKKHHRFNIWKHSYLKTCAVIDQELQQNRKIDSFFSGTTALSIVRQGELIVIANVGDSRAVLATTSDDGNLVSVQLTVDFKPNLPQEAERILECQGRVFCLHDEPGVHRVWLPDEESPGLAMSRAFGDYCVKEYGLISVPEVTQRNITNRDQFVVLATDGVWDVISNQEAVDIVSSTADRTNSAKRLVECAMHAWKRKRRGIAMDDISAICLFFHSSSPEQVVATLK 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi659g00030 349 Gene3D - 30 339 IPR036457 -
Sebi659g00030 349 PANTHER PROTEIN PHOSPHATASE 29 334 IPR015655 GO:0004722|GO:0006470
Sebi659g00030 349 Pfam Protein phosphatase 2C 68 311 IPR001932 -
Sebi659g00030 349 MobiDBLite consensus disorder prediction 7 28 - -
Sebi659g00030 349 SMART PP2C_4 35 334 IPR001932 -
Sebi659g00030 349 ProSiteProfiles PPM-type phosphatase domain profile. 44 336 IPR001932 -
Sebi659g00030 349 MobiDBLite consensus disorder prediction 1 28 - -
Sebi659g00030 349 FunFam Probable protein phosphatase 2C 34 35 338 - -
Sebi659g00030 349 CDD PP2Cc 43 336 IPR001932 -
Sebi659g00030 349 SUPERFAMILY PP2C-like 43 337 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi659g00030 Sebi-Chr659 474780 476961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi659g00030 1 337 PP2C-type Phosphatase Gene Family AT3G05640 71.681 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi659g00030 - - gmx:100793051 621.698