Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi659g00026 ATGACCATGAATAGAAAGTTACTGCAGAAAAACATTGACAATTTAGTGGTGACAAAAAAGGTGGTGGTCAACCCTGATGGTTCTGGGGATTTCACAACCATAAATGATGCAGTGGATGCTGCACCTAACAATACCGGCACCAACAATGGGTACTATGTAATTTATGTTGTTGCTGGGATTTACAATGAGTACGTGTCTATTGCTAAGAGCAAGGAGAATCTTATGATCATTGGAGATGGTATCAACAGCACTGTGATCACAGGCAATCGTAGCGTGGTCGATGGTTGGACCACTTTTCAATCCGCCACTTTTGCTGTGGTAGGAAAAGGGTTTGTTGCAGTGAACATAACATTTCGCAATACTGCGGGGTCCAGCAAGCATCAAGCGGTAGCTGTGAGAAATGGGGCGGACATGTCATCATTCTACAATTGTAGTTTTGAAGGGTACCAAGACACACTGTACGCTCATTCCCTTAGGCAATTTTTCAAAAACTGTGACATTTATGGCACAGTGGATTTTATATTTGGCAATGCAGCAGCAGTATTCCAGAGCTGTAACATGTATCCAAGACTTCCTATGCAAAACCAATTCAATGCAATCACAGCACAAGGCAGAACAGATCCTAACCAGAACACTGGATTCTCCATACAGAACTGTTGCCTAGTAGCTGCCAGTGAGTTAGGTGATGCTAGTAGTAATTATAATAACATAAAGACATATTTGGGTCGGCCTTGGAAGGAGTATTCAAGGACGGTTTATATTCAATCTTTCATGGATGGCCTAATTGATCCAAAGGGTTGGATTGAATGGTCAGGGGATTTTGCTTTAAGCACACTGTATTATGCAGAATTTGCTAACTGGGGACCAGGTTCAAATATTAGCAATAGGGTCACATGGGGAGGGTACCATCTCATTGATGAAAAGGATGCAAATGATTTCACAGTGGACAAATTTATACAAGGTGACACATGGTTGCCCAAGACAGGAGTGCCTTTCAAAGCAGGGTTATAG 1011 0.4214 MTMNRKLLQKNIDNLVVTKKVVVNPDGSGDFTTINDAVDAAPNNTGTNNGYYVIYVVAGIYNEYVSIAKSKENLMIIGDGINSTVITGNRSVVDGWTTFQSATFAVVGKGFVAVNITFRNTAGSSKHQAVAVRNGADMSSFYNCSFEGYQDTLYAHSLRQFFKNCDIYGTVDFIFGNAAAVFQSCNMYPRLPMQNQFNAITAQGRTDPNQNTGFSIQNCCLVAASELGDASSNYNNIKTYLGRPWKEYSRTVYIQSFMDGLIDPKGWIEWSGDFALSTLYYAEFANWGPGSNISNRVTWGGYHLIDEKDANDFTVDKFIQGDTWLPKTGVPFKAGL 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi659g00026 336 Gene3D - 15 336 IPR012334 -
Sebi659g00026 336 Pfam Pectinesterase 21 322 IPR000070 GO:0030599|GO:0042545
Sebi659g00026 336 ProSitePatterns Pectinesterase signature 2. 167 176 IPR033131 -
Sebi659g00026 336 FunFam Pectinesterase 14 336 - -
Sebi659g00026 336 PANTHER PECTINESTERASE 5 326 - -
Sebi659g00026 336 SUPERFAMILY Pectin lyase-like 18 335 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi659g00026 Sebi-Chr659 386190 387659 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi659g00026 15 336 Carbohydrate Esterase AT1G02810 68.731 1.98e-162 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi659g00026 K01051 - gmx:100810329 602.053