Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi658g00033 ATGTCCGACAACAAAGGCATAGACCAATACGGTGTTCTCCTCTATTACAAGTACGCTGAGATTCCGAACCTCGACGACCTCTCCACATTCTACCACTCCAACTGCTCCTCCCTCGGCCTCCTCGGTCGTGTTCGCCTTTCTTCTCACGGCGTCAATGTCACCGTTGGCGGCAACTTATCCTCTCTGGAGAGACACATTGAAGCCGTCAAGGCAAACAATAGCTTATTTGAAGGCACTGATTTCAAGCTTGCAACTTGTCATCAGCCACTGAATGACCAGGTTGCCAAGGAGTGTGGATTTACTTCTCTCTCAATTCGGATCGTTGAGGAACTGGTTACTCTCAGTTCTCATCCACTATTAAAGTCACCACAAATCTCAAATGCTGGAAGACATCTCTCTGCACTGGAGTTCCATTCTTCCATTCAGCATGCTAACAAGGAGAGTCCAGAAAACAGCCTGGTTTTACTTGATGCAAGGAATCTGTATGAAACAAGAATTGGGAAATTTCAGGCACCAAATGTTGAAACTTTGGATCCACAAGTCAGGCAGTATAGTGATTTTTCCTCATGGATAGATGATAATGGTGAGCAGTTGAAAGGCAAAAATATCCTCATGTATTGTACTGGTGGAATCAGGTGTGAAATGGCATCAGCCTATATTAGGTCAAAAGGTGCTGGGTTTGAGAATGTGTTCCAGTTATTTGGTGGTATACAACGGTATCTGGAGCAATTTCCAGATGGTGGCTTTTTCAAAGGAAAGAATTTTGTTTTTGATCACCGGGAGGATGTCACTTTGCTCTTGTCTTCTGGGCTAGTGTTGCAACAATTGGGTGACATGAATCCTCATTTCATTTCTTCTGTTGCTGCAGGATATCAGTTGGAAGCTCAGATGCTAATATTATTGGTACCTGCCTTATTTGTCACTGCTCATTTGATGATTACTCTTCACGCTGCCGATGTACTTGTTGCAGAATGCTTGTCTTGGTTTGTCAGAGTTGTCAGGAAGGGGAACAAAGATGAATCTGCACAGTATGTTTGTGAGCTATGCCAAAAACAGGACAAGGCGGTTAGGTCACAGCAGTTAGTTGAAAATGGTGAATCAAAACCATCAGTGCCAGGTGTTGAGTTCCATAATTTTTCTTCAGATACTATATTCTTGCCTCAAGTGCCTAGAGGAGATGATGTAAGGACCTCAAGGAAACTGAGAATCTTATGCTTGCACGGGTTTCGGCAGAATGCATCTGGTTTTAAGGGAAGAACAGCATCATTAGCCAAAAAACTCAAAAAATTTACTGAATTTGTTTTTATAGACGCACCTCATGAATTGTCATTCATTTATCAAACCCCCATGTCAGAGCCCCATGTGGATTGTGCACCGTCATCATTGCCACCTAGTCCTCTTCCACCGTCGGAGAATTGCAAGAAAAAGTTTGCATGGTTTGTGGCGCCTAATTTTAATGGAAGTAATGATGTTGATTGGAAGGTAGCAGATGGCCCATTTGATCCACTTCAATACCAGCAGCAAACTGCTGGATATGATATTTCACTATCACACTTGATGAATGTGTTCTCCCAAGAAGGGCCATTTGATGGAATCTTGGGATTTTCACAGGGAGCAGCAATGGCTGCCTTAATCTCTGCACAACAAGAAAAGCTAAAAGGTAAAATGGATTTTAAATTTGTAGTCTTGTGCTCAGGCTTTGCTCTCCATATGAAGGAAATGGAGCGTGGTCCTATCAAGTGCCCTTCTCTTCATATTTTCGGTAACGAACATGGTAAAGACAGACAGATAGCCAACCAAGCAAGCAAGGAACTTGCTTCACTATATGATGCCGGTTGTTCTGTGATCATTGAACATGATTGTGGTCATATAATTCCTACTCGGTCCCCATGTATTGATGAGATCAAGGATTTCCTTGGGCGTTTTCTGTAA 1932 0.4281 MSDNKGIDQYGVLLYYKYAEIPNLDDLSTFYHSNCSSLGLLGRVRLSSHGVNVTVGGNLSSLERHIEAVKANNSLFEGTDFKLATCHQPLNDQVAKECGFTSLSIRIVEELVTLSSHPLLKSPQISNAGRHLSALEFHSSIQHANKESPENSLVLLDARNLYETRIGKFQAPNVETLDPQVRQYSDFSSWIDDNGEQLKGKNILMYCTGGIRCEMASAYIRSKGAGFENVFQLFGGIQRYLEQFPDGGFFKGKNFVFDHREDVTLLLSSGLVLQQLGDMNPHFISSVAAGYQLEAQMLILLVPALFVTAHLMITLHAADVLVAECLSWFVRVVRKGNKDESAQYVCELCQKQDKAVRSQQLVENGESKPSVPGVEFHNFSSDTIFLPQVPRGDDVRTSRKLRILCLHGFRQNASGFKGRTASLAKKLKKFTEFVFIDAPHELSFIYQTPMSEPHVDCAPSSLPPSPLPPSENCKKKFAWFVAPNFNGSNDVDWKVADGPFDPLQYQQQTAGYDISLSHLMNVFSQEGPFDGILGFSQGAAMAALISAQQEKLKGKMDFKFVVLCSGFALHMKEMERGPIKCPSLHIFGNEHGKDRQIANQASKELASLYDAGCSVIIEHDCGHIIPTRSPCIDEIKDFLGRFL 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi658g00033 643 Pfam Serine hydrolase (FSH1) 399 634 IPR005645 -
Sebi658g00033 643 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 124 272 IPR036873 -
Sebi658g00033 643 FunFam esterase OVCA2 isoform X6 397 643 - -
Sebi658g00033 643 FunFam Rhodanese-like domain-containing protein 6 2 112 - -
Sebi658g00033 643 Gene3D - 2 112 - -
Sebi658g00033 643 CDD RHOD_YceA 129 242 - -
Sebi658g00033 643 SMART rhod_4 139 246 IPR001763 -
Sebi658g00033 643 FunFam Thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 2 119 273 - -
Sebi658g00033 643 Pfam UPF0176 acylphosphatase like domain 11 110 IPR040503 -
Sebi658g00033 643 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 7 642 IPR020936 -
Sebi658g00033 643 Gene3D alpha/beta hydrolase 397 643 IPR029058 -
Sebi658g00033 643 ProSiteProfiles Rhodanese domain profile. 149 249 IPR001763 -
Sebi658g00033 643 Gene3D - 121 271 IPR036873 -
Sebi658g00033 643 SUPERFAMILY alpha/beta-Hydrolases 389 643 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi658g00033 Sebi-Chr658 377588 382812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi658g00033 8 643 Sulfurtransferasese or Rhodanese AT1G09280 57.364 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi658g00033 - - mtr:25484701 964.14