Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi657g00021 ATGGGAGGTCTGCATCTGGGTTCAAAGGGCCCTGTGGTGGGAAAAGAAACTGATAATGTTCAGCAAGGTAGTTGTCCCTTTGTTTTGGAGGATGATGGGGAAGGTGTCTATGTTGTAGATGAGAATTGGGGCAATAGTTGTGCAGTAGAGGGTGTGGAACATACTGGTGGTCCAAATTTATCAGATAATAATGGTGCAACCGGCGAAGGTTATTATTGTGACGGTGAAAATGGGGGTGTTTTTTTGGTGGGAGAAGATTGGAATGATGAAAACTTGGAAGGTGATGGGGATAATGGTGGAGGGGATAAAATTTTAGTTGATACAAATGATGATATACTTAAGATGGGTGACTTGTCCTTCTTTAGTCCTCACGAAATAGAGAGATATGAATTTGGAAGTGTTGACATTGCATACAAGTTTTATTTTGAATATGGGTTTGCTAATGGGTTTGGGATACGAAAGGGTCGTACTTTGAAAAATAATAAAACGTTGGAAGAGTATCAGAAAGAGTTAATGTGCTGTAGAGCTGGGCAGCGCGAAGACCGTGGTCTTAAAATGGAAGATAGGGTCCGTGAGCCTAGAGCATTGACTAGGTGTGATTGTAAGGCCAGATTTCATGTTCGTGTCAATCGGTTTAGTGGTAGGTGGTTCTGTATTTGTTTCGAAGATGAACACAACCATGATCGTCTCGGTGCATTGCATTGCAGCATGCTTCCGGTTTACAGAAAAATGTCTGAGAGTGATGTGGTCCAAATGAACAACATGATGAAAGTTGGTATTCGACCACCAAATATATTTAACACATTTGCTAACCAGTCTGGGGGTTATGAGAAGATAGGGTTTCGGAAGAAAGACATGTATAACAAGATTAGTGAGCAAAGGCGGAGTTCTTGTTCCGATGCTAAAGGAGCTTTGGAATACCTAGATTTCACCAAAGGATTTGAGGATTGCATGCTTGGTTATTATGATGTGGGTACGTTCAGAAGAAAGTGGTTGGAACTGATTGCAAAATGTGAACTTCAAGAGAACACATGGGTGGCTGCTTTATATGAGAAGAGGAATATGTGGGCTACTGCTTACCTTCGTGGGAAATTTTTTGGTGGTTTTAGAACTACGTCACGGTGTGAGGGATTGCATTCAGAACTTGGAAAATTTGTCAACTCACGTTACAATTTGAGTGACTTCTTGCAACATTTTCAGCGGTGCCTGAATCATATGCGTTTCAAAGAGAAGGAGGATGACTTTACATCAATTCATGGTGAGCCACTGATACAAACAGAGTTACAAGGAATGAACTATCAGCAGCCAATGTCTATACGAGAAGAGTTTTTTTCTTATTTAGGCGAGTGCTGA 1353 0.4117 MGGLHLGSKGPVVGKETDNVQQGSCPFVLEDDGEGVYVVDENWGNSCAVEGVEHTGGPNLSDNNGATGEGYYCDGENGGVFLVGEDWNDENLEGDGDNGGGDKILVDTNDDILKMGDLSFFSPHEIERYEFGSVDIAYKFYFEYGFANGFGIRKGRTLKNNKTLEEYQKELMCCRAGQREDRGLKMEDRVREPRALTRCDCKARFHVRVNRFSGRWFCICFEDEHNHDRLGALHCSMLPVYRKMSESDVVQMNNMMKVGIRPPNIFNTFANQSGGYEKIGFRKKDMYNKISEQRRSSCSDAKGALEYLDFTKGFEDCMLGYYDVGTFRRKWLELIAKCELQENTWVAALYEKRNMWATAYLRGKFFGGFRTTSRCEGLHSELGKFVNSRYNLSDFLQHFQRCLNHMRFKEKEDDFTSIHGEPLIQTELQGMNYQQPMSIREEFFSYLGEC 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi657g00021 450 PANTHER OS01G0519700 PROTEIN 309 417 - -
Sebi657g00021 450 Pfam FAR1 DNA-binding domain 139 228 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi657g00021 Sebi-Chr657 432237 434020 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi657g00021 FAR1 1.8e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi657g00021 - - mtr:112420123 196.438