Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi657g00017 ATGGAAGAAATTTCTGATAGTAGGAGTATTTCAGAGACAGAGGAATGGGGGATGAGAGGTCTGCATCTGGGTTCAAAGGGCCCTGTGGTGGGAAAAGAAACTGATAATGTTCAGCAAGGTAGTTGTCCCTTTGTTTTGGAGGATGATGGGGAAGGTGTCTATGTTGTAGATGAGAATTGGGGCAATAGCTGTGCAGTAGAGGGTGTGGAACATACTGGTGGTCCAAATTTATCAGATAATAATGGTGCAACCGGCGAAGGTTATTATTGTGACGGTGAAAATGGGGGTGTTTTTTTGGTGGGAGAAGATTGGAATGATGAAAACTTGGAAGGTGATGGGGATAATGGTGGAGGGGATAAAATTTTAGTTGATACAAATGATGATATACTTAAGATGGGTGACTTGTCCTTCTTTAGTCCTCACGAAATAGAGAGATATGAATTTGGAAGTGTTGACATAGCATACAAGTTTTATTTTGAATATGGGTTTGCTAATGGGTTTGGGATACGAAAGGGTCGTACTTTGAAAAATAATAAAACGTTGGAAGAGTATCAGAAAGAGTTAATGTGCTGTAGAGCTGGGCAGCGCGAAGATCGTGGTCTTAAACTGGAAGATAGGGTCCGTGAGCCTAGAGCATTGACTAGGTGTGATTGTAAGGCCAGATTTCATGTTCGTGTCAATCGGTTTAGTGGTAGGTGGTTCTGTATTTGTTTCGAAGATGAACACAACCATGATCGTCTCGGTGCATTGCATTGCAGCATGCTTCCGGTTTACAGAAAAATGTCTGAGAGTGATGTGGTCCAAATGAACAACATGATGAAAGTTGGTATTCGACCACCAAATATATTTAACATGTTTGCTAACCAGTCTGGGGGTTATGAGAAGATAGGGTTTCAGAAGAAAGACATGTATAACAAGATTAGTGAGCAAAGGCGGAGTTCTTGTTCCGATGCTAAAGGAGCTTTGGAATACCTAGAGAACACATGGGTGGCTGCTTTATATGAGAAGAGGAATATGTGGGCTACTGCTTACCTTCGTGGGAAATTTTTTGGTGGTTTTAGAACTACGTCACGGTGTGAGGGATTGCATTCAGAACTTGGAAAATTTGTCAACTCACGTTACAATTTGAGTGACTTCTTGCAACATTTTCAGCGGTGCCTGAATCATATGCGTTTCAAAGAGAAGGGGGATGACTTTACATCAATTCATGGTGAGCCACTGATACAAACAGAGTTACAAGGAATGGAACTATCAGCAGCCAATGTCTATACGAGAAGAGTTTTTTTCTTATTTAGGCGAGTGCTGATGAGGGCACAAAATTTGAGTGTAAGTGGTATTTCACAGGCTCTTCGGTGTACCATTTTTTTAGTAGTCAGTGAAACTGGAAGGAGTGAGGAATGGAGGGTATGTTTGTATGACAATAGCAAGGAAATAAAATGTGCATGTCTCAGGATGGAATCTAGAGGGCTACCATGTGAGCATATAGTTTGTGTCTTGGCTCATCTAGGGATTGATGAGATCCCTGAAATATTGGTCCTTAAAAGGTGGAGCAAGGCTGCTAAGGATGGGTTAGGTTGTAAAGAATTTGAAGCAAATCATTGTGTGGACGTTGGCCGTAGGGCTAGGAAGGCTGCACTGGATGGTTTATATGACCATGTTAGTGATTTTAAGTCTGCAAGCATTGAAATGTTTAAGGCTGAACGGGACAGACTTGTCGAGGATTGGAGGCAATGTCGGGCTGATTTTGAAAGCGAACAAAATCTGGGATTAGGTGGTCCTACTTACACACACGATGGTCCAAGGAACCCAACACGTGCTTCAACCAAAGGTCATGCTGGTACTTCCACATCTGCAGGCATCAGAACTAGGAAAAAACAAAATTGTTCCATATGTAAGCTACCAGGTCACAACAAAGTCACTTATCCTAGTAGTAACCAACCTTGGCATTATTCTCATCTTCACAGCGCTGGTGGCTCCTCACAACAGAATGCTGCTGATGCTCAAACTGCTGAAGAATATGACTACTTTGACCCTGAATCTTGGCTGTGA 2049 0.4222 MEEISDSRSISETEEWGMRGLHLGSKGPVVGKETDNVQQGSCPFVLEDDGEGVYVVDENWGNSCAVEGVEHTGGPNLSDNNGATGEGYYCDGENGGVFLVGEDWNDENLEGDGDNGGGDKILVDTNDDILKMGDLSFFSPHEIERYEFGSVDIAYKFYFEYGFANGFGIRKGRTLKNNKTLEEYQKELMCCRAGQREDRGLKLEDRVREPRALTRCDCKARFHVRVNRFSGRWFCICFEDEHNHDRLGALHCSMLPVYRKMSESDVVQMNNMMKVGIRPPNIFNMFANQSGGYEKIGFQKKDMYNKISEQRRSSCSDAKGALEYLENTWVAALYEKRNMWATAYLRGKFFGGFRTTSRCEGLHSELGKFVNSRYNLSDFLQHFQRCLNHMRFKEKGDDFTSIHGEPLIQTELQGMELSAANVYTRRVFFLFRRVLMRAQNLSVSGISQALRCTIFLVVSETGRSEEWRVCLYDNSKEIKCACLRMESRGLPCEHIVCVLAHLGIDEIPEILVLKRWSKAAKDGLGCKEFEANHCVDVGRRARKAALDGLYDHVSDFKSASIEMFKAERDRLVEDWRQCRADFESEQNLGLGGPTYTHDGPRNPTRASTKGHAGTSTSAGIRTRKKQNCSICKLPGHNKVTYPSSNQPWHYSHLHSAGGSSQQNAADAQTAEEYDYFDPESWL 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi657g00017 682 MobiDBLite consensus disorder prediction 650 682 - -
Sebi657g00017 682 MobiDBLite consensus disorder prediction 1 15 - -
Sebi657g00017 682 Pfam FAR1 DNA-binding domain 156 245 IPR004330 -
Sebi657g00017 682 MobiDBLite consensus disorder prediction 600 621 - -
Sebi657g00017 682 ProSiteProfiles Zinc finger SWIM-type profile. 467 503 IPR007527 GO:0008270
Sebi657g00017 682 MobiDBLite consensus disorder prediction 1 33 - -
Sebi657g00017 682 MobiDBLite consensus disorder prediction 586 621 - -
Sebi657g00017 682 PANTHER OS01G0519700 PROTEIN 325 522 - -
Sebi657g00017 682 MobiDBLite consensus disorder prediction 650 668 - -
Sebi657g00017 682 SMART 26again6 478 505 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi657g00017 Sebi-Chr657 405410 408201 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi657g00017 FAR1 2.8e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi657g00017 - - tpra:123913749 256.529