Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi656g00018 ATGATTCAACAGGAAATCAGAAAAGGTCCCTGGACAGAACAGGAGGACTTCAAATTGGTGTATTTTGTTGGGCTATTTGGAGATCGTAGATGGGACTTTATAGCTAAGGTTTCAGGTTTGAGTAGAACAGGTAAAAGTTGCAGGTTACGTTGGGTTAATTACCTGCATCCTGATCTCAAACGAGGGAAGATGACACCTCAAGAAGAACGCCTTGTCATCGAGCTTCACTCCAAATGGGGAAATAGATGGTCACGAATTGCTCGCAAATTGCCAGGGCGCACAGATAATGAGATTAAGAATTACTGGAGGACTCACATGAGGAAAAAGAAGGCGATGGAGAAAAAGCGTGCTGCTGTTGCTGCAGCAGCAGCATCACCTTCATCTTCTAGTTGTCAATCCTCAGAATCATCAAATAATCAAGGTGTTGATTCCAAAGAATCTAGCGAAGAAAGCTTTTATGACACAGGTGGACCTGATAACATGATGACAGGCTCAACAGGAATTGATATTGTTGGGGAAGATGGAGAACAGGGGTACTCTATGGATGATATATGGAAAGATATTGCTATGTCAATAGATAATAACAACATGAATCTGCAACCACCAGTGAGTGAAGAAGGCTGCAATTTCTCTTGTCCTCCTCTTCTTCCATCATGGGATTATAATTATTCTTCAGATCAACTATGGGTGATGGATGAATTAGAAGAAAGCAAGATGTTATTCCCTGTAGGTGATCAATATTTTTCGTGCTATGGTGAAGGAAGCGCATTTTTAACCGGTTAA 783 0.4125 MIQQEIRKGPWTEQEDFKLVYFVGLFGDRRWDFIAKVSGLSRTGKSCRLRWVNYLHPDLKRGKMTPQEERLVIELHSKWGNRWSRIARKLPGRTDNEIKNYWRTHMRKKKAMEKKRAAVAAAAASPSSSSCQSSESSNNQGVDSKESSEESFYDTGGPDNMMTGSTGIDIVGEDGEQGYSMDDIWKDIAMSIDNNNMNLQPPVSEEGCNFSCPPLLPSWDYNYSSDQLWVMDELEESKMLFPVGDQYFSCYGEGSAFLTG 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi656g00018 260 ProSiteProfiles Myb-like domain profile. 3 55 IPR001005 -
Sebi656g00018 260 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 3 55 IPR017930 -
Sebi656g00018 260 Gene3D - 8 60 - -
Sebi656g00018 260 Pfam Myb-like DNA-binding domain 61 105 IPR001005 -
Sebi656g00018 260 Pfam Myb-like DNA-binding domain 8 55 IPR001005 -
Sebi656g00018 260 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 110 IPR017930 -
Sebi656g00018 260 MobiDBLite consensus disorder prediction 113 166 - -
Sebi656g00018 260 SMART sant 60 108 IPR001005 -
Sebi656g00018 260 SMART sant 7 57 IPR001005 -
Sebi656g00018 260 ProSiteProfiles Myb-like domain profile. 56 106 IPR001005 -
Sebi656g00018 260 FunFam Myb transcription factor 8 60 - -
Sebi656g00018 260 CDD SANT 63 106 IPR001005 -
Sebi656g00018 260 MobiDBLite consensus disorder prediction 123 146 - -
Sebi656g00018 260 SUPERFAMILY Homeodomain-like 5 102 IPR009057 -
Sebi656g00018 260 CDD SANT 10 55 IPR001005 -
Sebi656g00018 260 Gene3D - 64 109 - -
Sebi656g00018 260 FunFam MYB transcription factor 63 134 - -
Sebi656g00018 260 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 3 153 IPR044676 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi656g00018 Sebi-Chr656 405506 406583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi656g00018 1 258 MYB Transcription Factor Family AT5G59780 56.061 2.55e-81 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sebi656g00018 Myb_DNA-binding 2.1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi656g00018 K09422 - gmx:100776886 338.961