Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi655g00014 ATGGCTGTGAAACCTACCAAGGCCGAGAAGAAAGTAGCCTATGACGCCAAGCTGTGTCAGCTTCTGGAGGATTACACCCAAATCCTCATTGTGGCTGCGGACAATGTAGGATCCAACCAGCTTCAGAACATCCGAAAGGGTCTACGTGGCGACTCTGTGGTGCTTATGGGTAAGAACACCATGATGAAGCGCTCTGTGTGTCTAATGGATTGTTGGTTGAACTTGAACCAGGGTAATGTGGGGTTGATTTTCACAAAAGGTGACTTGAAGGAGGTTAGTGAAGAGGTTGCCAAGTATAAGGTGGGAGCTCCTGCTCGTGTTGGTTTGGTTGCACCCATTGATGTCGTTGTTCCTCCAGGCAACACTGGGCTAGACCCTTTTCAGACTTCTTTCTTCCAGGTGCTTAACATCCCTACCAAGATTAACAAGGGTACTGTGGAAATTATCACACCTGTAGAACTCATTAAAAAAGGAGACAAGGTTGGCTCATCTGAAGCTGCATTACTTGCCAAGCTTGGGATAAGGCCCTTCTCATATGGACTTGTTGTCCTTTCTGTTTATGACAATGGTTCAGTTTTTAGCCCTGAGGTTCTAGACCTGACTGAGGATGACCTCATTGAGAAGTTTGCCGTTGGTGTCTCCATGGTCACTTCACTTTCTTTGACCATCTCATACCCAACAATTGTAGCTGCACCACATATGTTTGTTAATGCCTATGAGAATGTCCTGTCTGTTGCAGTTGCAACTGACTATTCTTTCCCCCAGGCAGATAAGGTTAAGGAGTACCTGAAGGATCCTAGTAAATTTGCTGTAGCTGCTGTTGCTGCACCTGCTACTAATTCTAGCACAGCTCCGGGTACTGCTTCCAAAGAGGAGGAAAAGAAGGAAGAACCAGCGGAAGAATCTGATGATGACATGGGATTCAGTTTGTTTGATTAA 939 0.4579 MAVKPTKAEKKVAYDAKLCQLLEDYTQILIVAADNVGSNQLQNIRKGLRGDSVVLMGKNTMMKRSVCLMDCWLNLNQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPFQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLIEKFAVGVSMVTSLSLTISYPTIVAAPHMFVNAYENVLSVAVATDYSFPQADKVKEYLKDPSKFAVAAVAAPATNSSTAPGTASKEEEKKEEPAEESDDDMGFSLFD 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi655g00014 312 PIRSF L10E 1 312 IPR030670 GO:0042254
Sebi655g00014 312 Gene3D - 105 176 IPR043164 -
Sebi655g00014 312 Pfam Ribosomal protein L10 7 99 IPR001790 -
Sebi655g00014 312 MobiDBLite consensus disorder prediction 297 312 - -
Sebi655g00014 312 MobiDBLite consensus disorder prediction 276 312 - -
Sebi655g00014 312 FunFam 60S acidic ribosomal protein P0 104 177 - -
Sebi655g00014 312 Pfam Insertion domain in 60S ribosomal protein L10P 105 174 IPR040637 -
Sebi655g00014 312 Pfam 60s Acidic ribosomal protein 226 311 - -
Sebi655g00014 312 Gene3D - 6 200 IPR043141 -
Sebi655g00014 312 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 4 294 - -
Sebi655g00014 312 CDD Ribosomal_P0_L10e 9 176 - -
Sebi655g00014 312 SUPERFAMILY Ribosomal protein L10-like 8 126 IPR043141 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi655g00014 Sebi-Chr655 368219 370270 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi655g00014 1 311 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 79.375 7.13e-174 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi655g00014 K02941 - jre:108991896 507.679