Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi655g00004 ATGCAACGACGCCGCGTTGATTTCATCCACGCCGCCGCCACTGACCTCACCATCGCCGACCTCTTGTCCCCACCCGATGTCCCTCAAGTTCTCATCAAGGAACTCTTCCCTTTCCACCGCAAAATCAACTACACTGCACATTCCTCCCCTATCATGGCCGTTCAGGTCACTGAACTCGCCGACGGAATCTTCATCGGCTGCGCCATCTGCCACGCCGTCGTCGACGGAACCTCCCTCTGGAACTTCTTCAATACCTTTGCCGAAGTTTCCAGGGGAGTCACGCGTGCCTCCAATGTCCCGGACTTCCGCCGGGAATCTATTCTGGTCTCCAAGGTCGCGCTCCCGGTTGCCGGAAGCCGTGAATCAATTCAGAAGCTGAAAGCCAGAGTGAACCACCGGTCATTTCCGGAGAACGTCGACAACACCGTTGAGTTGGTGGGGAAGATGAGCAACGATCCTCAACAGAAAACAGTTACGAGCAACGAAACGGTTACGAAAAACGTAACCGTTCAAACGACAGAGATTTCATCGTTTCAGTCACTGTGCGCGCTGACGTGGCGCTGCGTGACGCGTGCGAGGAACTTAGAGGGATCGAAAACGACGACGTTTAGAATGGCGGTGAATGTTAGGCAGCGTTTGGAGCCAAAGTTGGGAGAGTACTACTTCGGGAACGCGATTCAGAGCATTGCAACGTGTGCTGCCGTGGGAGACGTGGTGTGTGGGGATTTGCGGTGGTGCGCGGAGGAGCTGAACAAGAACGTGAAGGCGTATGATAGCTCTATCGTGCGGCGCGTTGTAGAGAATTGGGAGCGCGAGCCGAAGATCTTCGAGCTGGGGAACCACGACGGTGCAACGGTGCAGATGGGAAGCTCGCCGAGATTCCCAATGTATGACAATGATTTTGGATGGGGGAAGCCCTTCGCGGTGCGGAGCGGCGGAGCCAACAAGTTTGATGGGAAGATCTCGGCGTTCCCGGGGAGGAAAGGCGGCGGAGCCGTCGATTTGGAGATGGTTTTGGCGCCGCAAACGATGGCGCGGCTCGAGTCTGATCCTGAGTTCATGCTTTTTGCGTCAGCTCAAGCATGA 1086 0.5599 MQRRRVDFIHAAATDLTIADLLSPPDVPQVLIKELFPFHRKINYTAHSSPIMAVQVTELADGIFIGCAICHAVVDGTSLWNFFNTFAEVSRGVTRASNVPDFRRESILVSKVALPVAGSRESIQKLKARVNHRSFPENVDNTVELVGKMSNDPQQKTVTSNETVTKNVTVQTTEISSFQSLCALTWRCVTRARNLEGSKTTTFRMAVNVRQRLEPKLGEYYFGNAIQSIATCAAVGDVVCGDLRWCAEELNKNVKAYDSSIVRRVVENWEREPKIFELGNHDGATVQMGSSPRFPMYDNDFGWGKPFAVRSGGANKFDGKISAFPGRKGGGAVDLEMVLAPQTMARLESDPEFMLFASAQA 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi655g00004 361 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 5 354 - -
Sebi655g00004 361 Gene3D - 118 352 IPR023213 -
Sebi655g00004 361 Gene3D - 2 114 IPR023213 -
Sebi655g00004 361 Pfam Transferase family 6 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi655g00004 Sebi-Chr655 173188 174334 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi655g00004 28 348 Monolignol Biosynthesis Gene Families AT5G48930 26.807 1.37e-28 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi655g00004 - - gmx:100792476 499.975