Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi653g00013 ATGAACGAACAGAGTATGTATGAGTCTGATATGGCTCTTTTGGACTCCATTCGCCGCCACTTGCTCGGCGATTCCGATGTATACAGATTCGGGGCTCCGTCTATAAATTCGGGTAACGCTCCAATTTACTGTCGGAGCTCCAGTTTCAGCAACTTGTACCCGTGTCTGAGTGACAATTGGGGCGAACTTCCACTCAAGGAAGACGATTCAGAAGACATGGTACTTTACGGTGTACTTCGCGATGCCGTTAATGTTGGGTGGGTCCCATCTCTCGATGCAGGCTCACCGGAGAGCTACTCGTCTGGTTCTCTGTCGACGGTAACCGTCAAATCGGAGCCGGATATTTTCCCGGCAGTTCAGAGTCCACCGGAGCAGGTCGTTCCGGCTCCGGTAATTCCAGAAGAGAAGGCTGCGCCGGCGAAGGCAAAGCATTACCGCGGCGTTCGGCGACGGCCGTGGGGGAAATTCGCGGCGGAGATCCGTGACCCGGCTAAGAATGGGGCCCGGGTTTGGCTCGGAACTTTTGAAACGGCTGAGGACGCTGCGTTGGCTTACGATCGTGCTGCGTACAGAATGCGAGGCTCGCGGGCTCTGTTGAATTTCCCGCTTCGGGTCAATTCGGGTGAGCCCGACCCGGTTCGAGTGACGTCGAAAAGGTCCTCATCGGATTCTTCTTGTTCTTCATCGTCGTCGGAGAGTGGGTCGACGGTGAAGCGGAGGAAGAAGATGGTGGGGCCAGTGGTGCCGGTGGTGACAGCTCAGAGTGAATTGAAAACTGAGCAAGTGGGAAGTCAAGTGGCAGAGTGCACACGTGGAGAACAGTTATTGGTCAGCTAA 837 0.552 MNEQSMYESDMALLDSIRRHLLGDSDVYRFGAPSINSGNAPIYCRSSSFSNLYPCLSDNWGELPLKEDDSEDMVLYGVLRDAVNVGWVPSLDAGSPESYSSGSLSTVTVKSEPDIFPAVQSPPEQVVPAPVIPEEKAAPAKAKHYRGVRRRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPDPVRVTSKRSSSDSSCSSSSSESGSTVKRRKKMVGPVVPVVTAQSELKTEQVGSQVAECTRGEQLLVS 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi653g00013 278 PRINTS Ethylene responsive element binding protein signature 168 184 IPR001471 GO:0003700|GO:0006355
Sebi653g00013 278 PRINTS Ethylene responsive element binding protein signature 145 156 IPR001471 GO:0003700|GO:0006355
Sebi653g00013 278 SMART rav1_2 144 208 IPR001471 GO:0003700|GO:0006355
Sebi653g00013 278 MobiDBLite consensus disorder prediction 208 245 - -
Sebi653g00013 278 Gene3D AP2/ERF domain 143 205 IPR036955 GO:0003700|GO:0006355
Sebi653g00013 278 ProSiteProfiles AP2/ERF domain profile. 144 202 IPR001471 GO:0003700|GO:0006355
Sebi653g00013 278 Pfam AP2 domain 144 194 IPR001471 GO:0003700|GO:0006355
Sebi653g00013 278 PANTHER DNA-BINDING DOMAIN 122 241 IPR044808 GO:0003700|GO:0009873
Sebi653g00013 278 CDD AP2 143 202 IPR001471 GO:0003700|GO:0006355
Sebi653g00013 278 MobiDBLite consensus disorder prediction 213 234 - -
Sebi653g00013 278 SUPERFAMILY DNA-binding domain 144 204 IPR016177 GO:0003677
Sebi653g00013 278 FunFam Ethylene-responsive transcription factor 2 143 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi653g00013 Sebi-Chr653 349543 350379 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi653g00013 8 277 AP2-EREBP Transcription Factor Family AT4G17500 54.035 1.91e-83 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sebi653g00013 AP2 1.5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi653g00013 K09286 - gmx:100819649 335.109