Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi653g00010 ATGTCTGTGTGGGCATTTGAAAGACATGCAAATAGTGATCACAGAAAACCCTATGAACATATTTACACCCTACAAACACAGGAAAATCTCCAAGATTGCCTCATTGCTGTGTGGCTTCATTCATCTGAAAGAGAACGCCGTCAAGAATTCTGCTTTTTTCCCAAGGAAAAACAAGAAGATGATCCTTGTTCAATATGTGCAAATGGGGGAGACATATTTCGTTGCGAGCATTGTCCCTCAGCATTCCATGCATCCTGTCTGAATATGGAGTTCACTGGCAATGTTTAA 288 0.4097 MSVWAFERHANSDHRKPYEHIYTLQTQENLQDCLIAVWLHSSERERRQEFCFFPKEKQEDDPCSICANGGDIFRCEHCPSAFHASCLNMEFTGNV 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi653g00010 95 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 53 94 IPR013083 -
Sebi653g00010 95 SUPERFAMILY FYVE/PHD zinc finger 57 89 IPR011011 -
Sebi653g00010 95 PANTHER PHD FINGER PROTEIN 12 1 90 IPR042163 GO:0003714|GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi653g00010 Sebi-Chr653 285733 286439 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi653g00010 2 90 PHD Transcription Factor Family AT5G36670 36.667 5.15e-13 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi653g00010 - - vun:114177457 105.145