Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi652g00031 ATGCACAAAACCGATTTTTTCAAACTATCATTGCAACTAACTCAAGAGAGAGCACTCAAAGGCCATGCAAACACTCTTTCACTTGGTTCTAAATGTCGCAACCCACGTGAAACAGTTGCTTGGACCGATTGTGTTGAGCTTTATGAACAAACCATTTATAGGCTCAACAAAACCTTAGACCCTAACACCAAGTTCTCCCAAGTTGATACTCAAACATGGCTCAGCACAGCCCTCACTAACCTTGAGGCATGCAAAGCTGGGTTCTATGAGCTTGGTGTTCAAGACTATGTGTTCCCTATGATGTCCAACAATGTTACTAAGTTGTTAAGTAACACCTTGGCTCTTAACAAGGTTCAATATCAAGAACCAAGTTATAAAGAAGGGTTCCCAACATGGGTTAAGCCACGTGACAGAAAGTTGTTGCAAGCATCTTCTCCATCTTCACAAGCTGATGTAGTGGTGGCAAAAGATGGGTCTGGAAAGTACACAACTGTCAGTGAAGCCATAAATGCTGCACCAAAAAGTAGCAGTGGAAGGTATGTGATATATGTGAAGGCAGGGACATATAATGAACAAGTTCAGATTAGGGCAAAGAATATAATGTTGGTTGGAGATGGTATTGGCAAGACCATAATCACAGGTAGCCAAAGTGTTGGAGGAGGCACCACAACCTTCCGTTCAGCCACTGTTGGTGTTGTTGGAGATGGATTTATTGCTCAAGATATAACATTTAGGAACACTGCTGGAGCAGCAAACCATCAAGCAGTTGCATTACGTTCTGGATCAGATTTATCAGTATTTTACAGATGTAGCTTTGAAGGTTATCAAGACACATTATATGTGCTTTCTCAGAGGCAATTCTATAGGGAATGTGACATTTATGGCACAGTTGACTTTATCTTTGGTAATGCTGCAGTGGTGTTCCAAAATTGTAATATTTTTGCTAGAAATCCTCCAAACAAAGTCAACACACTCACTGCTCAAGGAAGAACTGATCCAAACCAAAACACTGGTATTTCCATTCATAATTGTAGGGTTACTGCTGCCTCAGATTTGGAAGGTGTTCAAGGATCTGTTAGAACTTATCTTGGAAGACCATGGCAACAATATTCAAGGACAGTATTCATGAAGACATATCTTGATAGTTTGATAAATCCAGCAGGTTGGATGGAATGGAGTGGTAACTTTGCATTAAGTACTCTGTACTATGGAGAGTACATGAACACAGGTCCTGGTTCTTCTACTGCAAGTAGAGTGAATTGGCCAGGGTATCATGTCATTACCAGTGCTTCAGAAGCATCACAATTCACTGTTGCAAACTTCATTGCTGGTAACTCATGGTTGCCAGCCACCAGTGTGCCTTTCACCCCTGGTCTTTAA 1380 0.4123 MHKTDFFKLSLQLTQERALKGHANTLSLGSKCRNPRETVAWTDCVELYEQTIYRLNKTLDPNTKFSQVDTQTWLSTALTNLEACKAGFYELGVQDYVFPMMSNNVTKLLSNTLALNKVQYQEPSYKEGFPTWVKPRDRKLLQASSPSSQADVVVAKDGSGKYTTVSEAINAAPKSSSGRYVIYVKAGTYNEQVQIRAKNIMLVGDGIGKTIITGSQSVGGGTTTFRSATVGVVGDGFIAQDITFRNTAGAANHQAVALRSGSDLSVFYRCSFEGYQDTLYVLSQRQFYRECDIYGTVDFIFGNAAVVFQNCNIFARNPPNKVNTLTAQGRTDPNQNTGISIHNCRVTAASDLEGVQGSVRTYLGRPWQQYSRTVFMKTYLDSLINPAGWMEWSGNFALSTLYYGEYMNTGPGSSTASRVNWPGYHVITSASEASQFTVANFIAGNSWLPATSVPFTPGL 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi652g00031 459 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 4 118 IPR035513 -
Sebi652g00031 459 Pfam Plant invertase/pectin methylesterase inhibitor 5 115 IPR006501 GO:0004857
Sebi652g00031 459 Pfam Pectinesterase 151 445 IPR000070 GO:0030599|GO:0042545
Sebi652g00031 459 SMART complete 184 361 IPR006633 -
Sebi652g00031 459 SUPERFAMILY Pectin lyase-like 146 458 IPR011050 -
Sebi652g00031 459 CDD PMEI-like_3 5 117 - -
Sebi652g00031 459 ProSitePatterns Pectinesterase signature 2. 293 302 IPR033131 -
Sebi652g00031 459 Gene3D Invertase/pectin methylesterase inhibitor family protein 2 118 IPR035513 -
Sebi652g00031 459 Gene3D - 145 459 IPR012334 -
Sebi652g00031 459 NCBIfam pectinesterase inhibitor domain 6 117 IPR006501 GO:0004857
Sebi652g00031 459 FunFam Pectinesterase 145 459 - -
Sebi652g00031 459 ProSitePatterns Pectinesterase signature 1. 176 195 IPR018040 -
Sebi652g00031 459 PANTHER PECTINESTERASE 5 451 - -
Sebi652g00031 459 SMART PMEI_2 1 115 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi652g00031 Sebi-Chr652 522843 524529 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi652g00031 3 459 Carbohydrate Esterase AT2G45220 68.341 0.0 661
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi652g00031 K01051 - gmx:100781697 825.854