Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi652g00027 ATGACGAAGCTTCTCGCCTGGGGTCGCAAGCTAACGAGGGGAGCAAGGTCCATCTGCGCCAGAAACGGGTCAAGTTACATTCCGATTGGATCCGACCCGGTTCAGGACAAGGCTCCGGCGGTGCCAAAGGGGCACTTGGCGGTGTACGTGGGGCAGAAGGACGACGAGTTTCACCGGGTTCTGGTGCCGGTGGTTTACTTCAACCACCCTTTGTTTAGTGAGCTGCTACGAGAAGCGGAGAAGGAGTACGGGTTTCACCACCCGGGTGGGATCACGATCCCTTGCCGGGTCACCGAGTTTGAACGAGTCAAGACCCGAATTGCATCCGGGTCGGGTGTCAGCAACAGCGCAAGGAGATTGGCGTGGCGGCGAAATTATTGA 381 0.5801 MTKLLAWGRKLTRGARSICARNGSSYIPIGSDPVQDKAPAVPKGHLAVYVGQKDDEFHRVLVPVVYFNHPLFSELLREAEKEYGFHHPGGITIPCRVTEFERVKTRIASGSGVSNSARRLAWRRNY 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi652g00027 126 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 27 102 IPR003676 GO:0009733
Sebi652g00027 126 Pfam Auxin responsive protein 32 104 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi652g00027 Sebi-Chr652 457033 457413 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi652g00027 39 100 Calmodulin-binding Proteins AT3G43120 53.226 2.30e-17 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi652g00027 K14488 - gmx:100808164 203.371