Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi652g00024 ATGTCCGCCTCATCTACAACTTCCTTTTCACCGGACCAACACCTCTCTCCCTCCGACCAGCTCTGTTATGTCCAATGCAACTTCTGTGACACTGTCCTCGCGGTGAGTGTTCCTTGCAGCAGTTTGTTCAAGACTGTCACAGTGAGATGTGGTCATTGCACCAACCTTCTCTCAGCCAACATGCGTGGCCTTCTTCTTCCTTCTGCTAATCAGCTTCACCTTGGCCACTCCTTCTTCACTCCTCAAAATCTTCTCGAGGAGATTCGGAATGCACCTTCAGCAAATATGATGATGAATCAGATGCCAAATCCAAATGATTTGATGATGAGCAACATGCGAGTAGGGCCAGAAGAAACCCCTAAACCTCCACCAGCTAATAGACCTCCAGAGAAGAGACAGAGAGTTCCATCTGCTTACAACCGCTTCATCAAGGATGAGATCCAACGCATCAAAGCTGGGAATCCTGATATAAGTCACAGAGAAGCCTTTAGTGCAGCTGCAAAGAATTGGGCCCATTTTCCACACATTCATTTCGGACTTATGCCTGATCATCAACCCGTGAAGAAAGCTAATGTTCGTCAGGAAGCAGAGGATGTGCTTATGAAAGATGGGTTTTTCGCACCAGCAAATGTAGGTGTCTCTCCCTACTAG 651 0.4716 MSASSTTSFSPDQHLSPSDQLCYVQCNFCDTVLAVSVPCSSLFKTVTVRCGHCTNLLSANMRGLLLPSANQLHLGHSFFTPQNLLEEIRNAPSANMMMNQMPNPNDLMMSNMRVGPEETPKPPPANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQPVKKANVRQEAEDVLMKDGFFAPANVGVSPY 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi652g00024 216 Gene3D High mobility group box domain 118 198 IPR036910 -
Sebi652g00024 216 PANTHER PROTEIN YABBY 6-RELATED 4 192 IPR006780 GO:0007275
Sebi652g00024 216 SUPERFAMILY HMG-box 121 174 IPR036910 -
Sebi652g00024 216 MobiDBLite consensus disorder prediction 112 134 - -
Sebi652g00024 216 CDD HMG-box_SF 134 170 - -
Sebi652g00024 216 FunFam Axial regulator YABBY 125 197 - -
Sebi652g00024 216 Pfam YABBY protein 17 180 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi652g00024 Sebi-Chr652 391708 394165 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi652g00024 28 214 C2C2-YABBY Transcription Factor Family AT4G00180 63.636 1.27e-69 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Sebi652g00024 YABBY 5.3e-73 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi652g00024 K25796 - gmx:100781267 399.438