Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi652g00014 ATGTTCATATCTTCTCCACATGTTCCACGCTGGCTCCAAGTACTCCTCACTGAGAAGTTCTACAACGCTTGCTTAATTCATGAAGGGATTAGAAGATATATGTATCAAGATGTTATAAGGTTGGATGATGCTGGAAAGCTAGTTGACTGCACTTCTGTTCAGCACTACAAAACCAACAGTGCAAAAGTAGTATTTTTAAACCAAAGGCCACAACCAAGGAACTTCAAAGGCTCCGGCAATTTCTGCAGCACCTGCGACAGAAGTCTGCAAGACCCATACCAGTTCTGCTCTCTTTCTTGCAAGATCAACCACCTTGTTGGAACAAAAGGTTGTCTCTCTGGGTACCTATTATTCGAGTGCAACCACATGTCCCTGCCGGAGACCGGGTTCGATGACTGTCCGATGACCCCTGACTCGGTTCTCGAACCGGCCGGTTCAGGTGGGGTGGATTGCAGGACCACCCTTGCAAGCATTGCCACTGCTAACATTGTGAAGAAAAAGAGGAGTGGCGGTCCGGCTAACCGGCCGGCGTGTCGACCGGAAAATGAAGTTGCCGTGGGTTTGATGAATCGGAGGAAAGGGAACCCACAGAGGGCCCCACTGTATTGA 609 0.491 MFISSPHVPRWLQVLLTEKFYNACLIHEGIRRYMYQDVIRLDDAGKLVDCTSVQHYKTNSAKVVFLNQRPQPRNFKGSGNFCSTCDRSLQDPYQFCSLSCKINHLVGTKGCLSGYLLFECNHMSLPETGFDDCPMTPDSVLEPAGSGGVDCRTTLASIATANIVKKKRSGGPANRPACRPENEVAVGLMNRRKGNPQRAPLY 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi652g00014 202 Pfam PLATZ transcription factor 31 102 IPR006734 -
Sebi652g00014 202 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 30 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi652g00014 Sebi-Chr652 281456 283191 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Sebi652g00014 PLATZ 6.3e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi652g00014 - - gmx:100787153 298.901