Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi651g00011 ATGACCGTAAGCGCTTCCGACAGTCACAAGAAGCGGGAACAACTTGTTTCTCGAATTGCCTTCGGATCATGCTCCAACCAAAGCGCTCCTCAGCCCATTTGGGATGCAGTAGTAGATTTCCATCCCCAAGTTTTTGTATGGCTGGGTGATAACATTTATGGAGACATCAAACGCCCTTTTAAAATATTTGGAAAGGAAAGGACTATTGGGCCATGGAAGAATGTTCCTCGGTTTGTTCCTTCTTCAGAGCAGGAAATGGAGGCTAGGTACAGAAAGGCTAAGTCTAATCCTGGCTATGCTCAACTTCATGAGAATGTTGAGGTTATTGGCACATGGGATGATCACGATTATGGATTAAATGATGCAGGAAAAGAACTTCATGGAAAAACAACCAACCAAAGGTTACTTCTTGATTTCTTGGATGAACCTCAAGATAGTCCAAGGCGGAAACAGGCTGGTGTATATGCCTCATATACATATGGTCCTGAGGGTAGAGATGTCAAGATTATCCTCTTAGATACCAGATACCACAGAGACTCTATAGGAAGTGATGGAACCATTTTGGGGAATTCACAATGGTTGTGGTTGGAGAGAGAGCTAAAGGGTCCACCAACAGCCATTACCATAATTGGATCTTCTATTCAGGTTATATCAAATCTTACAGCAACCCTTCACCCATTGTTCTCAATGGAATCTTGGGGTCGTTTTCCCAAGGAAAGAGATCGCCTTTTCAAATTAATAGCAGATAGTAAGAGGGGTGGAGTATTTTTTATAAGTGGAGATGTTCACTTTGGGGAAATTACAAGATATGACTGTGCTTTGGACTACCCACTATATGATGTAACCTCAAGTGGGCTTACTCAATCAATTGAGGAGGTTGTCCCACCTTCCTTGCGTTTTTTAGTGAGATTTGTTGCATGGTTGACCCCATCTACAATGAGAGTTAAGGACCAAAACTGCAGATACAGTTCTTGTATATATGGGCAGCCAAACTTTGGAACTATAGAAATAGATTGGGATTCTCATCCAGTGACTCTGAACCTCAAAGTCAGGGACAAGAATGGTGTCATCGTTACAGGTGTCAATACTTCATTGATGGAATTACAACCATCAAATTCAGAGACTAGGGACAGAGTAAAAGCAGGACATGATCAGAGGCATTGCACTCTTGAAGTTAGCCTGTCATGGATTATAAGACATCGCCTGCCGATCATAGTTTGTTTCACTTTAGTTGTGTTGCTTCTTGCATTCCTAGGGCTTGTTTATACTTCTGTCAAATATTCCTCTGTTATTGTTCTGGTAATAACTTTCTCCATCCCAGAAACACAAGCACAACAAGAATACGTTAACAACAAACAGCTAGATTGTGACAACGAATACAACTCCACAAAAGGCAATCTTTGCAACAGCATCCCTTCATGTCAATCTTACCTGACCTTCAAATCTTCCCCTCCTGAATACAACACCCCCACTTCAATCTCCTACCTTCTCAACTCAAAACCTTCCCTCATAGCCACATCCAACAACATCACCGATGTTGATCCCATCTCCACCGACACCATGATCACCATCCCCATCGATTGCTCCTGTTCCGGCAAATACTACCAACACAACGCTTCCTACACCTTGAAGAGAAAAGGGGAAACCTACTTCACTGTTGCCAACAACACCTACCAAGCTCTTACCACGTGTCAAGCTCTCATAGCTCAGAACACCTATGCGGTTCACAACCTTTTAGCTGGTGATAACCTCACTGTGCCTCTCAGGTGCGCTTGTCCTACCAAGAAACAGAGTGATGCAGGGTTCAAGTACTTGCTCACTTACCTTGTTTCTCAAGGGGAATCGTATTCTTCAATTGGTGATATCTTTGGTGTTGATGAACAGAGCATTTTGGATGCAAACGAGCTTTCTTCTAGTTCTGTTATTTTCTACTTTACACCCCTTTTGATTCCTCTTAAAAACGACCCACCCAAGAAGATACAGAGAGCAGCGTCTCCGCCGGAGAGTCCGCCGCCGCCGCTGATAACTCCGGCGGAGGACGATGGTTCCAGCTCTTCTAAGAAATGGGTTATTGTTGGTGTCACGGTTGGTGTTGTTTTGCTACTCTTAGTGGTTCTCCTTGTGTTTTTCCTCTGTTTCTATCGCCGCCGCCGGGAGGCTCCGGCGGCTCCGCCGCCGGAGCTTAAGGCTTTCTCGGATTCCACCACCAAGAAGATGTCGGATATTACCCCAACAACTCAATCATGGTCTCTTTCTTCTGAGGGGATTCGTTATGCTATTGAGTCTTTGACTGTTTACAAGTTTGAGGAGTTGCAGAATGCTACAGGGTTTTTCAGTGAAGAGAATAGGGTCAAAGGGTCTGTTTATAGAGCTTCTTTCAAGGGTGATGATGCTGCTGTTAAGATTCTTAAAGGGGATGTGTCTGCTGAGATTAACATTTTGAAGAGGATTAACCATGCTAATATTATAAGGTTGTCTGGTTTTTGTGTCTACAAAGGTAACACTTATCTTGTGTATGAGTTTGCTGAGAATGATTCTCTTGATGATTGGCTTCATTCTGAGAAGAAGTACCAGAATTCCATGTCTCTGAGTTGGACTCAGAGAGTTCAGATTGCTCATGATGTTGCTGATGCACTCAATTACCTTCATAATTATACTAACCCTCCTCATATTCATAAGAATTTGGAAAGTGGTAATGTTCTTTTGGATGGAAGTTTTAGAGCTAAAGTTTCAAACTTTGGGTTAGCAAGAGCTATGGAGAATCAAGGAGGAGATGAGGGGTTCCAATTGACAAGGCATGTGGTGGGGACTCAAGGTTACATGGCACCTGAGTATATTGAGAATGGTTTGATTACTCCAAAGATGGATGTTTTTTCATTTGGGGTTGTGATTTTGGAGCTTCTTTCAGGAAGAGAGGCTGTTAGTGGGGAGAAGAATGGATCAGGGGAGAAGCTTCTGTCAGCAACTGTGAGTCAAGTGCTTGAAGGAGAGAATGTTAGGGAGAAACTTAGAGGTTTCATGGATCCAACTTTGAGAGGTGAATACCCTTTGGATCTGGCATATTCCATGGCAGAGATTGCCAAACGATGTGTTGCTCGTGACCTCAATTCACGACCAAACATTTCTGAGGTTTTCATGACTCTGTCTAAGATTCAATCCTCTACACTGGATTGGGATCCATCTGATGAGTTTGAACGGTCCAGATCTGTTAGCCAAATCTCTGATAGCAGATAG 3234 0.4314 MTVSASDSHKKREQLVSRIAFGSCSNQSAPQPIWDAVVDFHPQVFVWLGDNIYGDIKRPFKIFGKERTIGPWKNVPRFVPSSEQEMEARYRKAKSNPGYAQLHENVEVIGTWDDHDYGLNDAGKELHGKTTNQRLLLDFLDEPQDSPRRKQAGVYASYTYGPEGRDVKIILLDTRYHRDSIGSDGTILGNSQWLWLERELKGPPTAITIIGSSIQVISNLTATLHPLFSMESWGRFPKERDRLFKLIADSKRGGVFFISGDVHFGEITRYDCALDYPLYDVTSSGLTQSIEEVVPPSLRFLVRFVAWLTPSTMRVKDQNCRYSSCIYGQPNFGTIEIDWDSHPVTLNLKVRDKNGVIVTGVNTSLMELQPSNSETRDRVKAGHDQRHCTLEVSLSWIIRHRLPIIVCFTLVVLLLAFLGLVYTSVKYSSVIVLVITFSIPETQAQQEYVNNKQLDCDNEYNSTKGNLCNSIPSCQSYLTFKSSPPEYNTPTSISYLLNSKPSLIATSNNITDVDPISTDTMITIPIDCSCSGKYYQHNASYTLKRKGETYFTVANNTYQALTTCQALIAQNTYAVHNLLAGDNLTVPLRCACPTKKQSDAGFKYLLTYLVSQGESYSSIGDIFGVDEQSILDANELSSSSVIFYFTPLLIPLKNDPPKKIQRAASPPESPPPPLITPAEDDGSSSSKKWVIVGVTVGVVLLLLVVLLVFFLCFYRRRREAPAAPPPELKAFSDSTTKKMSDITPTTQSWSLSSEGIRYAIESLTVYKFEELQNATGFFSEENRVKGSVYRASFKGDDAAVKILKGDVSAEINILKRINHANIIRLSGFCVYKGNTYLVYEFAENDSLDDWLHSEKKYQNSMSLSWTQRVQIAHDVADALNYLHNYTNPPHIHKNLESGNVLLDGSFRAKVSNFGLARAMENQGGDEGFQLTRHVVGTQGYMAPEYIENGLITPKMDVFSFGVVILELLSGREAVSGEKNGSGEKLLSATVSQVLEGENVREKLRGFMDPTLRGEYPLDLAYSMAEIAKRCVARDLNSRPNISEVFMTLSKIQSSTLDWDPSDEFERSRSVSQISDSR 1077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi651g00011 1077 SMART LysM_2 607 651 IPR018392 -
Sebi651g00011 1077 SMART LysM_2 540 587 IPR018392 -
Sebi651g00011 1077 Gene3D Phosphorylase Kinase; domain 1 751 841 - -
Sebi651g00011 1077 MobiDBLite consensus disorder prediction 1056 1077 - -
Sebi651g00011 1077 Pfam Protein kinase domain 805 1044 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi651g00011 1077 ProSiteProfiles Protein kinase domain profile. 774 1056 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi651g00011 1077 Gene3D LysM domain 594 662 IPR036779 -
Sebi651g00011 1077 SUPERFAMILY Protein kinase-like (PK-like) 760 1045 IPR011009 -
Sebi651g00011 1077 MobiDBLite consensus disorder prediction 659 684 - -
Sebi651g00011 1077 CDD MPP_PhoD 18 288 IPR018946 -
Sebi651g00011 1077 Pfam PhoD-like phosphatase 20 272 IPR018946 -
Sebi651g00011 1077 Gene3D - 16 369 IPR038607 -
Sebi651g00011 1077 FunFam PTI1-like tyrosine-protein kinase 3 842 1062 - -
Sebi651g00011 1077 MobiDBLite consensus disorder prediction 1059 1077 - -
Sebi651g00011 1077 Pfam LysM domain 608 651 IPR018392 -
Sebi651g00011 1077 MobiDBLite consensus disorder prediction 663 677 - -
Sebi651g00011 1077 ProSiteProfiles LysM domain profile. 606 650 IPR018392 -
Sebi651g00011 1077 SUPERFAMILY Metallo-dependent phosphatases 26 356 IPR029052 -
Sebi651g00011 1077 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 430 1061 - -
Sebi651g00011 1077 MobiDBLite consensus disorder prediction 723 746 - -
Sebi651g00011 1077 Gene3D Transferase(Phosphotransferase) domain 1 842 1068 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi651g00011 Sebi-Chr651 188501 197453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi651g00011 428 1070 Receptor kinase-like Gene Family AT2G33580 54.737 0.0 645
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Sebi651g00011 Pkinase 5.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi651g00011 - - gmx:100818534 969.148