Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi650g00012 ATGACTTTTGTAACCACCATGCTATTCCTCCTATTGACAATATCCACCCTAATATATGTCCTATCACTTCATGCAAGAACCACAAAACGAAACTACAAACTCCCACCAGGACCTTCTCCACTTACCATTATAGCAAACCTTCTTGACCTTGGAAGAAAGCCTCAACAGTCACTAGCCAAGCTCGCTAAAACACATGGCCCAATAATGCGTCTCAAGTTAGGCCAAGTAACCACCATAGTCATCTCCTCAGCAGAAATAGCGAAAGAAGTGCTTCAAACCCATGACCTCTTATTCTCAAACCGAACAATTCCTCAAGCCGTAGCAGTTCTCAACCACGACCATTACAGCTTACCGTTTATGCCAGTTTCAGATCTTTGGCGAGACCTTAAGAAAATATGCAAAAATCAATTGTTCTCTATCAAGACGCTTGATGCAAGCCAAGACCTTAGACGAAGGAAACTGCAAGAGCTACTCATTGATATTCATAAAAGTGAAGCTGATGAGTACAAGGATATAATACTGAATCTCGTGAAAGCAATAGCAACACCAAACTTGGATCTATTTGTTGCGGGAACTGATACAACTTCTTATGCAATAGAAATGGCAATGGCTGAGCTAATGCACAACCCAAATACAATGTCCAAAGCCAAAATGGAGCTTGAGCAAACCATTGGTATAGGCAATCCTATTGAAGAATCAGACATTGCTAGACTCCCATACTTGCAAGCCATAATAAAAGAAACCTTACGTTTGCACCCACCAGGTCCACTTTTGCTGCCTCGAAAAGCGAAGGTAGATGTGGAAATTCATGGCTACACAATCCCACGAGGTGCACAAGTTCTTATTAATCAATGGGCCATGGCAAGGAACCCCAAACATTTGGGATAG 888 0.42 MTFVTTMLFLLLTISTLIYVLSLHARTTKRNYKLPPGPSPLTIIANLLDLGRKPQQSLAKLAKTHGPIMRLKLGQVTTIVISSAEIAKEVLQTHDLLFSNRTIPQAVAVLNHDHYSLPFMPVSDLWRDLKKICKNQLFSIKTLDASQDLRRRKLQELLIDIHKSEADEYKDIILNLVKAIATPNLDLFVAGTDTTSYAIEMAMAELMHNPNTMSKAKMELEQTIGIGNPIEESDIARLPYLQAIIKETLRLHPPGPLLLPRKAKVDVEIHGYTIPRGAQVLINQWAMARNPKHLG 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi650g00012 295 Gene3D Cytochrome P450 27 180 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi650g00012 295 PRINTS E-class P450 group IV signature 238 254 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi650g00012 295 PRINTS E-class P450 group IV signature 272 286 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi650g00012 295 SUPERFAMILY Cytochrome P450 29 293 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi650g00012 295 PRINTS P450 superfamily signature 190 207 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi650g00012 295 PRINTS P450 superfamily signature 243 254 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi650g00012 295 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 180 292 - -
Sebi650g00012 295 Gene3D Cytochrome P450 181 295 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi650g00012 295 Pfam Cytochrome P450 179 292 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi650g00012 295 Pfam Cytochrome P450 35 164 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi650g00012 Sebi-Chr650 374452 376726 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi650g00012 4 292 Cytochrome P450 AT3G26180 34.459 2.71e-46 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi650g00012 - - qsu:112003658 256.914