Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi64g00053 ATGAGTCAAATGACAAATGAGATCAAAGATGAGGTGCTCTGCAATGATCAGACTAGGTCCAGGTTGAACGATGACAGTAACGGAGGAGGTGATGATGGAATTGGTCTGAAGAGAGGACCATGGACACCTGCAGAAGATGCTATCTTGATTGATTATGTCAAGAAGCATGGAGAGGGGAACTGGAATGCTGTTCAGAAGTACTCAGGCCTGTCTCGTTGCGGCAAAAGTTGTCGACTGCGATGGGTAAATCACCTAAGGCCAGATTTAAAGAAAGGGGGGTTTACTGCAGAAGAGGAGCAGATGATTGCTGAACTGCATGCCAAAATGGGAAACAAATGGGCACGTATGGCAGCACATTTGCCTGGTCGTACAGATAATGAAATAAAAAACTACTGGAACACCCGGATCAAGAGGTGTCAAAAGGCTGGCTTGCCACTTTATCCTCCTGAAGTGTCTTTCCGAGCATTGCAAGAGAGTCAGCATAGTCAAGCTACTGGTGGAATTAATGATGGAGATAGAGGGAATCATGATTTCTCGCCAAAAATCAACTATGATGCAATATTTGACAGTTTGAAGGAAAATCAGGGAATCTTACCTTTTGTGCCTGAGGTTCCTGATATTTCTGCTAATAGCATTATGTTAAGCTGCGTTGGTTCTCCTCCATATTGTAATTTTGTGCCATCAAAATTACCTAACCAAAGTCATATTCACGAATCAACAATGTCTTTTCTTGGTTCCAGTGGTACAAACAGGAATGGGTTTTATCCATTTGACCATATTGAGGATAATACTTCTGATAAGATTGCACAATCATTTGCATTGCAATCTCACGTTGATCCTGGTTCCTCCTCACATAGCTCAATTTGTTACAGCCACTCACTATCAAGTGGCAATTCCTCTACTTCTAAGCCGACTTTCGAGGCTGTGAAGTCGGAGCTCCCTTCACTCCAATATCCAGAAACCGATTTTGGTAGCTGGGGTACCCCTCCCCCACCACCATTGAATGAGTCTATTGATGTTTTCATTCAGTCTCCTCCTCCACCTGGTGCGCTAGATTCAGGTTGTTCTTCACCTCATAATAGTGGCTTGCTTGATGCCTTACTTTATCAGGCTAAGACTCTTGCTTGTTCAAAGAACAATTGTTCTGACAAGAGTTCAAATTCATCTACTGCAACTCCTGGTGACAGAGCTGAGAGTTCTGCTTTGAACATGTATGAGACAGAGTGGGAGGATTATGCTGACCCTGTATCTCCCTTCGGTGCAACTTCAATCCTGAATGAGTGTCATACTGTTAGAACCAATGGAAACTCAAGGGATAAATGGGCACCTGTTCAGAACTTTAGTGGCAACAATGTGAAATTAGAGTCTGTTGACCAAGTTTGCACCCCGACGAGTGAAAATCAAGCCATGTCTCTGTTGAATATCACTTGGCCAGATGTCTTGTTAGCTTCAGATTGGCATGAGCAGTGTTCTGGGCATGGCATTTGGCAAGAACCAAGCAATCATAACTGA 1512 0.4345 MSQMTNEIKDEVLCNDQTRSRLNDDSNGGGDDGIGLKRGPWTPAEDAILIDYVKKHGEGNWNAVQKYSGLSRCGKSCRLRWVNHLRPDLKKGGFTAEEEQMIAELHAKMGNKWARMAAHLPGRTDNEIKNYWNTRIKRCQKAGLPLYPPEVSFRALQESQHSQATGGINDGDRGNHDFSPKINYDAIFDSLKENQGILPFVPEVPDISANSIMLSCVGSPPYCNFVPSKLPNQSHIHESTMSFLGSSGTNRNGFYPFDHIEDNTSDKIAQSFALQSHVDPGSSSHSSICYSHSLSSGNSSTSKPTFEAVKSELPSLQYPETDFGSWGTPPPPPLNESIDVFIQSPPPPGALDSGCSSPHNSGLLDALLYQAKTLACSKNNCSDKSSNSSTATPGDRAESSALNMYETEWEDYADPVSPFGATSILNECHTVRTNGNSRDKWAPVQNFSGNNVKLESVDQVCTPTSENQAMSLLNITWPDVLLASDWHEQCSGHGIWQEPSNHN 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi64g00053 503 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 90 140 IPR017930 -
Sebi64g00053 503 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 33 89 IPR017930 -
Sebi64g00053 503 FunFam MYB-related transcription factor 37 90 - -
Sebi64g00053 503 CDD SANT 40 85 IPR001005 -
Sebi64g00053 503 SMART sant 90 138 IPR001005 -
Sebi64g00053 503 SMART sant 37 87 IPR001005 -
Sebi64g00053 503 Gene3D - 93 139 - -
Sebi64g00053 503 CDD SANT 94 134 IPR001005 -
Sebi64g00053 503 Pfam Myb-like DNA-binding domain 38 85 IPR001005 -
Sebi64g00053 503 Pfam Myb-like DNA-binding domain 91 134 IPR001005 -
Sebi64g00053 503 Gene3D - 38 90 - -
Sebi64g00053 503 MobiDBLite consensus disorder prediction 1 38 - -
Sebi64g00053 503 ProSiteProfiles Myb-like domain profile. 33 85 IPR001005 -
Sebi64g00053 503 FunFam Transcription factor GAMYB 93 139 - -
Sebi64g00053 503 ProSiteProfiles Myb-like domain profile. 86 136 IPR001005 -
Sebi64g00053 503 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 5 493 - -
Sebi64g00053 503 MobiDBLite consensus disorder prediction 378 397 - -
Sebi64g00053 503 SUPERFAMILY Homeodomain-like 35 132 IPR009057 -
Sebi64g00053 503 MobiDBLite consensus disorder prediction 378 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi64g00053 Sebi-Chr64 1610726 1614263 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi64g00053 36 492 MYB Transcription Factor Family AT3G11440 44.142 1.24e-109 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sebi64g00053 Myb_DNA-binding 4.4e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi64g00053 K09422 - gmx:100805804 714.146