Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi64g00052 ATGTCTCATCCATTCACACCAGTTAAACAAGAAAATCAGCAGGCCAACAAACATGAAGCACACCAAATGGTTGAACAACTAGGGAGTTTTGTTTGCTCTGTGTGCAATAACATGAGACCAAAATATGAGTGGAAGAGAGACTTCACATATGCTGAGTTGCATGCAGCCACACAAGGTTTTTCCCCAAAGAACTTTCTGTCAGAAGGTGGGTTTGGTTCTGTCTACAGAGGAGAGCTGCAAGGACAGAAAATTGCTGTTAAGCAGCATATGCATGCAAGCTACAAAGGAGAGAAGGAATTCAAGTCTGAAGTTGATGCACTTAGTAAAGCAAGACATGAGAATGTGGTAATGCTGCTGGGATCATGTTCAGAAGGAAACCACAGGCTTCTTGTTTATGAATATGTCTGCAATGGTTCATTGGACCAACATTTATCACAACATTCTCGTAAACCACTTTGCTGGCAAGACAGGATGAAGATAGCTAATGGAGCTGCCAAAGGATTGCTATACCTGCACGAGAACAGCATCATACACAGGGATATAACACCAAACAACATTCTTCTTACACATGATTATGAAGTATTGCTGGGTGATTTTGGTTTGGCTAGAATCGTAACTGAAGAATCCTCATGCTCGATAGACTGTGATGGAAATCTGGCATATTGGGCACCAGAATATGCAGAATTTGGCAAAGTGTCAATTAAAACAGATGTGTATTCTTTTGGGGTGGTTCTACTACAGCTAATAACAGGAATGAGGACCACAGACAGAAGACTTGGAGAAAAAGGTCTAGTAGGATGGGCAAGATCAGCACTAAGAGAAGGGAAATGTCAAATACTTATTGATGGAAGGATGATGAACTCCCATGACTGCCATCAACTATATTGGATGAGCCGTCTGGCTGGAAATTGTCTCAAGAAAGATCCCCATAAGCGATTGGATATAAGTACAGTGGTCAAAGCCTTAAATCATATAGTGGAAGGTTGCAATTGCTGCATTGCGGGTAAAGACCATACCCTTGCCATGTCAGGCTATTCTAAGTCCAAAGATAATATGTTGGGCTCTTCAGATTCAGAAGGTGGTGAAAGTGGAAATATTGGTACATCCAACAGTGCAAAATTGAAAGAGAAAGCTAAATAA 1140 0.4114 MSHPFTPVKQENQQANKHEAHQMVEQLGSFVCSVCNNMRPKYEWKRDFTYAELHAATQGFSPKNFLSEGGFGSVYRGELQGQKIAVKQHMHASYKGEKEFKSEVDALSKARHENVVMLLGSCSEGNHRLLVYEYVCNGSLDQHLSQHSRKPLCWQDRMKIANGAAKGLLYLHENSIIHRDITPNNILLTHDYEVLLGDFGLARIVTEESSCSIDCDGNLAYWAPEYAEFGKVSIKTDVYSFGVVLLQLITGMRTTDRRLGEKGLVGWARSALREGKCQILIDGRMMNSHDCHQLYWMSRLAGNCLKKDPHKRLDISTVVKALNHIVEGCNCCIAGKDHTLAMSGYSKSKDNMLGSSDSEGGESGNIGTSNSAKLKEKAK 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi64g00052 379 MobiDBLite consensus disorder prediction 351 372 - -
Sebi64g00052 379 FunFam Proline-rich receptor-like protein kinase PERK8 22 134 - -
Sebi64g00052 379 Gene3D Transferase(Phosphotransferase) domain 1 135 337 - -
Sebi64g00052 379 ProSitePatterns Tyrosine protein kinases specific active-site signature. 176 188 IPR008266 GO:0004672|GO:0006468
Sebi64g00052 379 PIRSF ILK 5 338 - -
Sebi64g00052 379 Pfam Protein tyrosine and serine/threonine kinase 64 322 IPR001245 GO:0004672|GO:0006468
Sebi64g00052 379 Gene3D Phosphorylase Kinase; domain 1 32 134 - -
Sebi64g00052 379 ProSiteProfiles Protein kinase domain profile. 60 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi64g00052 379 SUPERFAMILY Protein kinase-like (PK-like) 42 326 IPR011009 -
Sebi64g00052 379 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X1 135 337 - -
Sebi64g00052 379 MobiDBLite consensus disorder prediction 351 379 - -
Sebi64g00052 379 PANTHER OS01G0253100 PROTEIN 22 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi64g00052 Sebi-Chr64 1602924 1605592 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi64g00052 48 332 Trihelix Transcription Factor Family AT5G38560 42.953 1.26e-72 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Sebi64g00052 PK_Tyr_Ser-Thr 5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi64g00052 - - vvo:131659948 548.51