Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi64g00050 ATGAGTACAGAACCTCAAACGGTGGTGGTGATCCAAGATGCATCAAGAGATGTTAGTTTAAAGGCAATGGAAAGGGCCCTGAAAAAGTTATCTGTTAAAGCTGGAGATCAGCTTATAATTGTTGCTATTCTTGATTGGTTTAGCAGTCCCATGGGTTACAATGTCAGCGTGGATTCCAGTTCATTTGTTGCAACAAACAAGAAAATCATTGATGAAAACCATAACAGGAAAAAGAAAGCCTATAGTAAGAACCGTTACATCAATGAGCTCTCTGAGTACTGTAAAATGAACAAGATTGAATTCCAAACAGAAGTGCTTATAGGCCCTGCTGCTCAGGTTATTTCTGAGGCTGCAAGAAAATTTCGTGCTACAAGTTTGATACTTGATAGACAGATGCACAAAGATAAGAAGTATTTCATGCACCGGATCCGTTGTGGTATGTATAGGATAACAAGTGACAACTCCATTGAAAAGTTGAAAGATCCGAATTCAACAGCCGCCAAACTTGCTGAAAGGCAAGAAAATGTAAGCTATGGAGAAATGATACCAGGAAGCACTGAGGAAGCAGTTTCTATTCAGATGTCCAGGTCCTCATCAAGTGATCTGTTCACATTACCTGGAGTTTCAAGTCAGTGGAGTACTGAAGCCTCTACTTCTAGTATTGGTGGAAGTTCACAATATGTAGAACAAGAAACAAAAGAGAACAGATCACTATTTCACATTTCTGTGAATCAAGAAACAAGTCAAACAGAAGTAAATCAAAAAGAGAGACTAATTGATTACAAGGAACAGCAAAGCAGCAATAATGAAACATCTCATATGGAGGAAGAATTTACAAATCCACTTTGTTCAGTGTGCAAGAATAGGAGACCAAAAATTGGATGCAAGATAGACTTGAGTTATGCAGAGCTCTACACTGCTACCCAGGGATTTTCTGCTAAGAACTTTCTGTCAGAAGGTGGGTTTGGATCTGTCTACAAAGGACAGCTAAATGGAATGACAGTTGCTGTTAAGCAACATAAAAGTGCAAGCTTCCAAGGAGAGAAGGAATTCAAGTCTGAAGTCAATGTACTTAGCAAAGCAAGACATGAGAATGTGGTCATGCTACTAGGTTCATGCGCAGAAGGAAATAATAGGCTTCTTGTTTATGAATATGTCTGCAATGGATCACTTGACCAACATCTCTCAGTACACTCTCGGTCACCTCTTACTTGGAAAGATAGGATGAACATAGCTCTTGGAGCAGCCAAAGGCTTACTATACTTACACAAAAATAACATAATACACAGAGACGTGAGACCAAACAATATCCTTATAACACATGATCATCAACCAATGCTGGGAGACTTTGGATTAGCACGAAATCAAAATCAAGACTCAATACACTCAACCGAAGTTGTTGGAGCTTTGGGGTATTTGGCACCAGAGTATGCAGAACATGGCAAAGTGTCAACTAAAACAGATGTATATTCTTTTGGGGTGGTTCTACTACAGCTTATAACTGGAATGAGAACTACAGACAAAAGACTCGGAGGAAGAAGTCTTGTGGGATGGGCAAGGCCACTTTTAAGAGATAGGAATTATCCAGATTTAATTGATGAAAGGATCATTAACTCTTATGATTACCATCAACTGTTTTGGATGGTACGGATAGCAGAAAAATGTCTAAGCAGGGACCCTAAGAAGAGACTAAATATGGTTGCGGTAGTTAATGCTTTAACTGACATTGTGGAAGGCAACACATGTGACATTGGAATGAGAGATTACTCCCCTGCAAGGTCAGATTCATCCTATAGTGGATCAGATTTTGATGAATCTGAAGATGAAATGTTGGGACGCTTTGAGATTGAAGTAAAGAAATTGTGCAAAATCAGTAAAAGACATAATGTCATTGATAATTTAAAATCGTTGGAAACTGGTTGTGACCATGCTGAGCTACCGGAAGCCCCTGACAGTCGTTGGAAAAGTAGCGTAGTGAAGAGCTGCCGTTGTGGTTGTCCCGGCTTGCGCACGATTGAGGTCTGCACGTGCCCACATGATGGTTGTCCCAGGAGGATTGCAAAATCGCACGAAGCTCTCCACCACATGAATAGTGGGCAACGACGCAACGGGGGACTAGTAAGGTTGTCGCGCATCGCCATCGACGAGAAAACGATGGAGGGATCCAGGTGCCCGCACGCGCGATGGTTGCCCCGAGTGGATTGCAAAATCGCACGAAGCTCTCCACCGCGTGAACAATGGGCAACGGTGAAACGAGGTACTGGCAAGGCTGTCGCGCATCGCCGTCGACGGGAAAACGATGGAGGTCTGCATGTGCCCGCACGATGGTTGTCCCGGACAGATTTCTAA 2349 0.4227 MSTEPQTVVVIQDASRDVSLKAMERALKKLSVKAGDQLIIVAILDWFSSPMGYNVSVDSSSFVATNKKIIDENHNRKKKAYSKNRYINELSEYCKMNKIEFQTEVLIGPAAQVISEAARKFRATSLILDRQMHKDKKYFMHRIRCGMYRITSDNSIEKLKDPNSTAAKLAERQENVSYGEMIPGSTEEAVSIQMSRSSSSDLFTLPGVSSQWSTEASTSSIGGSSQYVEQETKENRSLFHISVNQETSQTEVNQKERLIDYKEQQSSNNETSHMEEEFTNPLCSVCKNRRPKIGCKIDLSYAELYTATQGFSAKNFLSEGGFGSVYKGQLNGMTVAVKQHKSASFQGEKEFKSEVNVLSKARHENVVMLLGSCAEGNNRLLVYEYVCNGSLDQHLSVHSRSPLTWKDRMNIALGAAKGLLYLHKNNIIHRDVRPNNILITHDHQPMLGDFGLARNQNQDSIHSTEVVGALGYLAPEYAEHGKVSTKTDVYSFGVVLLQLITGMRTTDKRLGGRSLVGWARPLLRDRNYPDLIDERIINSYDYHQLFWMVRIAEKCLSRDPKKRLNMVAVVNALTDIVEGNTCDIGMRDYSPARSDSSYSGSDFDESEDEMLGRFEIEVKKLCKISKRHNVIDNLKSLETGCDHAELPEAPDSRWKSSVVKSCRCGCPGLRTIEVCTCPHDGCPRRIAKSHEALHHMNSGQRRNGGLVRLSRIAIDEKTMEGSRCPHARWLPRVDCKIARSSPPREQWATVKRGTGKAVAHRRRRENDGGLHVPARWLSRTDF 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi64g00050 782 PANTHER OS01G0253100 PROTEIN 200 577 - -
Sebi64g00050 782 FunFam Proline-rich receptor-like protein kinase PERK8 273 385 - -
Sebi64g00050 782 ProSiteProfiles Protein kinase domain profile. 311 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi64g00050 782 SMART tyrkin_6 311 573 IPR020635 GO:0004713|GO:0006468
Sebi64g00050 782 ProSitePatterns Tyrosine protein kinases specific active-site signature. 427 439 IPR008266 GO:0004672|GO:0006468
Sebi64g00050 782 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X1 386 588 - -
Sebi64g00050 782 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 5 129 - -
Sebi64g00050 782 Gene3D Transferase(Phosphotransferase) domain 1 386 588 - -
Sebi64g00050 782 Pfam Protein tyrosine and serine/threonine kinase 314 572 IPR001245 GO:0004672|GO:0006468
Sebi64g00050 782 Gene3D HUPs 1 143 IPR014729 -
Sebi64g00050 782 Gene3D Phosphorylase Kinase; domain 1 266 385 - -
Sebi64g00050 782 SUPERFAMILY Protein kinase-like (PK-like) 299 579 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi64g00050 Sebi-Chr64 1571390 1579343 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi64g00050 299 584 Trihelix Transcription Factor Family AT1G70460 46.801 2.37e-75 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Sebi64g00050 PK_Tyr_Ser-Thr 1.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi64g00050 - - gsj:114417376 900.582