Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi64g00025 ATGTTGATCAGATACAGTGGTGGTAGCAGCAGAAGAATACTCTATCTATGGTTATTTACCATCAAATTGATTTACCTTTTCTGTTTTGTTGCTTGCCAGAATAGTAGCGATACACAACTACTTGATTATAGATATGCTTGTTTGGATCAATCTTCTGTTCCTCCTTCTAGCACATACCAAACCAACCTCAACAATCTGATATCTTCACTCTCATCTGATTCTGCTACCAGCAATGGTTTTGGGAATAGAACTTCAGGCAGTGATCAAAGCAATATGGTTTATGGACTCTACCTTTGCCGTGGTGATGTGAATACAAGCCTTTGCCATTCATGTGTTCAAAACTCTAGCAGATTGTTAAGGCAACACTGCCCCAATAATGCCTCAGCTATTTTGTGGTACCCTTTTTGTCTTCTGAGGTACTCAAACCAGAATTTCTTTGGCAAACTCACCACAAGACCAAGGATTCCTATGTTTGATGCAAGGCAGAATTTTACTAGTGCTGGAGAATTTGACAGTGATGCTAGGGTTTTGATGAATGGTTTGATACAAATGGGTTCAGAGTCAACCTTGATGTTTGGGACACATATGTTCAATATAAATGGTACTCAAAGAAGGTATGGCTGGGTACAGTGCAGCAGAGATATTACTAGTGAGGAGTGCAGGACATGTTTGAGCAATATGCTTGAGGATGTTGAAAATTGCTGTGAGGAGAAGAAGGTGTGGCGTGTCTTTTCTCCAAGCTGTATTGTGATGTATGAAACCCAACCATTCTTTCTAAATGGTACACTACCTGATGCGCCAGCACCTCAGCAAGTTATGGATTTCTTTGCATCTCCTATATTAACCTATGTAGAAAACAAAGCCAAAGAAGGGGGTAACACAAGGTCTTGGATTATAATTATTGCTGTTGTAATTGGAACTGTAGTGGTAGCTCTATTGGCTGTCAGCACATACTACTTCTGGTGCTTGAAACGTAAAAAAGACAAACATGCCAAACAAGAAGATGGACTAAATCCAATGTTTTCTCAAGATCAGATTGACAAGGGGGAGTCTGTGAATGCTGACCTACCTATGATGCCTCTGAGTACTATTCTAACAAGTACTGGTAGTTTTTCTGATGAATATAAATTGGGTAGAGGTGGATTTGGCACTGTTTTTAAGGGTGTTTTACCAGATGGAAAGCAAATAGCTGTTAAAAGGCTTTCAAAAACTTCTGTTCAAGGTGTGGATGAATTCAAGAATGAAGTAATATTGATTGCAAAATTGCAGCATCGAAACCTTGTGAGACTGTTGGCTTGCTGCATTGAACAAAATGAAAAGCTGCTTATCTATGAATACATGCCCAATTCAAGCCTTGATTTCCATCTATTTGATAAGGTGAAAGGTGCAGAACTTAATTGGAAACAGCGATCAAACATTATTAATGGGATTGCTAAAGGGCTCCTATATCTTCATGAGGACTCTAGACTCAGGGTTATTCACAGAGACCTGAAAGCTAGCAATATTCTATTAGATCATCAAATGAATCCAAAAATCTCAGACTTTGGACTGGCAAGAACATTTGGAGGAGACCAGTGGCAGGCAAATACAATTAAAGTTGTGGGGACTTATGGATATATGGCTCCAGAATATGCAATGGAAGGCTTGTTTTCAGTTAAGTCAGATGTTTTCAGCTTTGGTGTTATTTTGCTAGAGATCATCAGTGGAAAAAAGAATGCTAGATTCTATCTTTCAGAGCATGGTCAAAGCCTTCCCATATATGCATGGAACCTCTGGTGTGAAAGCAAAGGTTTGGAATTGATGGATCCATTAATAGAAAAGTCATGTGTACTTAGTGAAGTTCTGAAGTGTATACACATTGGTCTGTTGTGTGTACAAGAAGATGCAGCAGATAGACCTACAATGTCAAGTGTTGTTCATATGCTTGCAAGTGACACAGTGACTCTACCCAGGCCAACACGCCCTGCATTTTCTGTTGGAAGGGCTGTCATTGAACAAGGGTCTTCATCAAACACTTCTATCTCTGTCAATGAAGTAACTCTGTCTGAAGTGAGGCCTAGGATGTCTAGGTTAGTAACAATGATCATGCACCATGGAGGGAAGTTGATGAGGAATGAAGAGAATGAGCTTGATTACATAGGGAGTGAAGTGGATGTTTGGGAGGACCTTGATTCAGATTTGATTCATAGGTTCTTGATCATTGACTTATGCAAGTTGCACAATTACCACAGGATAGATCATTGTTATTGGTTAGCCCTAGAAAAAAGTTTGGAAGATGGTCTAAGGGAGTTGAGGTGGGACTGCGATACAGATGTGCTTGACATGTGTATTGCTTCTATGCGTAATGATGGGGAGATTGAAGTTTTTATTGAGCACCCTGTGGTGGAAAACCAAACATTTTCTAAAAGCAGGGGTCATGTAGGTGAAAAAGAAGGAGCTGAAAATGTTAAAGAGAGTGATGAAGAAGGTTTTGTCAATCAGCAAAATGAAGGAGTTGAAGAGACCAAAGAGAAGGAAGATAGTCTTTATAGGCCTCCTCCTATTATTAGTGAAGATGATAAGGAGGAGGAGGTTGTGGTTGATAGGGGTTCTGGTTCTAATATAAGAAGGAAGAGGGCACAAAATTTTGATGACATCATAAGTGGGGATGAGACAGACTCTGGTAGTGAGGACATAAGTGACCAAATGCATGATGAAGATGCACAACCAGTGGAGAACTTTGAAGGAGTCGCAGGACCATTGCAGATTGATGATGCAGAAGTTGAGGAGGATGCTTCAAAGCATTAA 2787 0.3997 MLIRYSGGSSRRILYLWLFTIKLIYLFCFVACQNSSDTQLLDYRYACLDQSSVPPSSTYQTNLNNLISSLSSDSATSNGFGNRTSGSDQSNMVYGLYLCRGDVNTSLCHSCVQNSSRLLRQHCPNNASAILWYPFCLLRYSNQNFFGKLTTRPRIPMFDARQNFTSAGEFDSDARVLMNGLIQMGSESTLMFGTHMFNINGTQRRYGWVQCSRDITSEECRTCLSNMLEDVENCCEEKKVWRVFSPSCIVMYETQPFFLNGTLPDAPAPQQVMDFFASPILTYVENKAKEGGNTRSWIIIIAVVIGTVVVALLAVSTYYFWCLKRKKDKHAKQEDGLNPMFSQDQIDKGESVNADLPMMPLSTILTSTGSFSDEYKLGRGGFGTVFKGVLPDGKQIAVKRLSKTSVQGVDEFKNEVILIAKLQHRNLVRLLACCIEQNEKLLIYEYMPNSSLDFHLFDKVKGAELNWKQRSNIINGIAKGLLYLHEDSRLRVIHRDLKASNILLDHQMNPKISDFGLARTFGGDQWQANTIKVVGTYGYMAPEYAMEGLFSVKSDVFSFGVILLEIISGKKNARFYLSEHGQSLPIYAWNLWCESKGLELMDPLIEKSCVLSEVLKCIHIGLLCVQEDAADRPTMSSVVHMLASDTVTLPRPTRPAFSVGRAVIEQGSSSNTSISVNEVTLSEVRPRMSRLVTMIMHHGGKLMRNEENELDYIGSEVDVWEDLDSDLIHRFLIIDLCKLHNYHRIDHCYWLALEKSLEDGLRELRWDCDTDVLDMCIASMRNDGEIEVFIEHPVVENQTFSKSRGHVGEKEGAENVKESDEEGFVNQQNEGVEETKEKEDSLYRPPPIISEDDKEEEVVVDRGSGSNIRRKRAQNFDDIISGDETDSGSEDISDQMHDEDAQPVENFEGVAGPLQIDDAEVEEDASKH 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi64g00025 928 ProSitePatterns Serine/Threonine protein kinases active-site signature. 492 504 IPR008271 GO:0004672|GO:0006468
Sebi64g00025 928 MobiDBLite consensus disorder prediction 803 824 - -
Sebi64g00025 928 FunFam Cysteine-rich receptor-like protein kinase 10 155 257 - -
Sebi64g00025 928 Pfam Domain of unknown function (DUF3403) 644 687 IPR021820 GO:0004674
Sebi64g00025 928 SUPERFAMILY Protein kinase-like (PK-like) 356 642 IPR011009 -
Sebi64g00025 928 ProSiteProfiles Gnk2-homologous domain profile. 151 257 IPR002902 -
Sebi64g00025 928 Gene3D Transferase(Phosphotransferase) domain 1 447 649 - -
Sebi64g00025 928 ProSiteProfiles Gnk2-homologous domain profile. 41 145 IPR002902 -
Sebi64g00025 928 MobiDBLite consensus disorder prediction 800 928 - -
Sebi64g00025 928 FunFam Cysteine-rich receptor-like protein kinase 28 43 144 - -
Sebi64g00025 928 SMART serkin_6 371 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi64g00025 928 CDD STKc_IRAK 377 642 - -
Sebi64g00025 928 ProSitePatterns Protein kinases ATP-binding region signature. 377 399 IPR017441 GO:0005524
Sebi64g00025 928 MobiDBLite consensus disorder prediction 890 904 - -
Sebi64g00025 928 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 338 446 - -
Sebi64g00025 928 Gene3D Phosphorylase Kinase; domain 1 334 446 - -
Sebi64g00025 928 MobiDBLite consensus disorder prediction 831 879 - -
Sebi64g00025 928 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 447 650 - -
Sebi64g00025 928 Gene3D - 156 257 IPR038408 -
Sebi64g00025 928 Gene3D - 41 145 IPR038408 -
Sebi64g00025 928 ProSiteProfiles Protein kinase domain profile. 371 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi64g00025 928 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 52 683 - -
Sebi64g00025 928 Pfam Salt stress response/antifungal 52 143 IPR002902 -
Sebi64g00025 928 Pfam Salt stress response/antifungal 162 254 IPR002902 -
Sebi64g00025 928 Pfam Protein tyrosine and serine/threonine kinase 375 642 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi64g00025 Sebi-Chr64 503485 510572 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi64g00025 24 687 Receptor kinase-like Gene Family AT4G05200 41.642 6.57e-171 512
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sebi64g00025 PK_Tyr_Ser-Thr 4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi64g00025 - - gmx:100798691 1105.51