Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi64g00002 ATGGCTAATCTGAATAGTCCATTTGTTTCTCTTAAGGACATTGTTAATGAGAGGAGTGAGGCCTTAAGGCTAAAAGTTAGAGTTGTTAGGGTTTGGGAAATATGCCAAAGAAACAATCCTTCCAATGTTTTTTCTGTTGAGATGGTTTTGGTAGATGCGGAGGGTGGGAGAATCCAGGCAAGTATAAGGAAAGCAATGATCAGAAAATTTAAGAGCTCTACTGTTGAGGGTGGAGTGTATAAGATGATTTATTTTAGTCTGGTTGAAAATGGGGGTGAATATAGAGCATGTTCCCATCAGTTTAAGTTTCTGTTTCAGCCAAGGACAAGGATTTTCCCCACTGAAAGTGAGGTGATACCTAGATTTGGTATCCAGGCTAAGGATTTTGAGGAGCTTCAACAAACTAATGGTGTTTCCCATTATATGTTTGATTTCATTGGCCTTTTGACTGCTGTTGGTGAGGAGAGGGAGTTTATGAAATTTGGGAGACCGATTAGGGTGCTTGAGATAGAGCTCACAGATGATAAGGCTGTCATGAAATGTTCATTATTTGGGCACTTCATTGAAATGATGAAAAATTTCTTGGCTAATGGTGTGGATGACCTTGGTATTTTGGTTATTCAGTTTGCAAAGGTGAAGGAATACCTTGGTCAAGTTTCCCTTCATACCGTGGATAACTCCACAAGGCTACTTTGGAATCCTCAGATTTCAGAGGTTATTTCATTTAAGGACAGGCTCAAGTTGGAAGTTAGGGACCATAGTGAAACTGCTCATTTCGTGCTGTTTGATTTTGACGTTGCCTCTTTGTTATCTATGTCATGTGCATCTATTGTTGGTGATGCCAAGGTTCCTACCCTTCATTATCCCCCTGAGTTGGACATGCTCATTGGCAAGGAGCTTTTGTTTAAGGTTGAAGTGAAGGCTGAGCGTGCCTTTAAATTTGATGATTCTTTCAAGATGAAGCTGAAAGGACCTGTGAATGAGGTGTTTAATGTGGAGGATGACCAGCCTGGAGATGAGTCAACACCCCCTGAAATTGCTCCTCTCATTGAACAGTACAATGAAGCTGAAATGAGTCCCCTGTCTCTTGGAGAGTCTTCGGGTGCTGCTGCATGCTTGGCTCCACAAAAACGTAAGGCTGGGCCACGTCCTGGCCGTGGTGGCCCTGCAAAGAAGAGCCTGCATCCAAAGGTGCTCAAGGTCGAGAAGAATTAG 1215 0.4263 MANLNSPFVSLKDIVNERSEALRLKVRVVRVWEICQRNNPSNVFSVEMVLVDAEGGRIQASIRKAMIRKFKSSTVEGGVYKMIYFSLVENGGEYRACSHQFKFLFQPRTRIFPTESEVIPRFGIQAKDFEELQQTNGVSHYMFDFIGLLTAVGEEREFMKFGRPIRVLEIELTDDKAVMKCSLFGHFIEMMKNFLANGVDDLGILVIQFAKVKEYLGQVSLHTVDNSTRLLWNPQISEVISFKDRLKLEVRDHSETAHFVLFDFDVASLLSMSCASIVGDAKVPTLHYPPELDMLIGKELLFKVEVKAERAFKFDDSFKMKLKGPVNEVFNVEDDQPGDESTPPEIAPLIEQYNEAEMSPLSLGESSGAAACLAPQKRKAGPRPGRGGPAKKSLHPKVLKVEKN 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi64g00002 404 SUPERFAMILY Nucleic acid-binding proteins 7 115 IPR012340 -
Sebi64g00002 404 CDD RPA1_DBD_A_like 23 111 - -
Sebi64g00002 404 SUPERFAMILY Nucleic acid-binding proteins 127 250 IPR012340 -
Sebi64g00002 404 CDD RPA1_DBD_B_like 144 247 - -
Sebi64g00002 404 Gene3D - 7 116 IPR012340 -
Sebi64g00002 404 MobiDBLite consensus disorder prediction 358 404 - -
Sebi64g00002 404 Pfam Domain of unknown function DUF223 47 115 IPR003871 -
Sebi64g00002 404 Gene3D - 119 256 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi64g00002 Sebi-Chr64 37857 40278 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi64g00002 24 238 Core DNA Replication Machinery Family AT2G06510 25.551 7.74e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi64g00002 - - lja:Lj0g3v0341019.1 216.083