Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi649g00004 ATGGATCTTATGTCAGAAACAATCCAGAGCTCTAAACTGCTGTCTGTTTGCACTTTAATTTTTTTTACCTTTATAAGAGCTTGCAGTTCCCTTGATTTCATTGTTCCAGGTCAAACTGTACCAGATGGTTACTATCTCGTTTCAGGAGGTGGAACTTTTGAACTGGGATTTTTCAGCCCTGGGAAATCCAAAAGCAGGTATTTGGGTATATGGTACAAGAACATATCTCCTTTAACAGTTGTATGGGTGGCCAACAGAGAAACACCACTCTCTGACACCAGAGGAGTTTTAAAGCTCAATCATCATGGAGTTCTTCTCCTTGTCAATAGCACAAACAACACTATTTGGTCTTCCAACTTCACAAGTTCAAGAACAGCAGCAGAGAAGCCCATTGCACAGCTCTTAAACTCAGGAAATCTTGTTGTGAGGGATGGCAATGATAGTGAGGGAAACTTCATCTGGCAGAGTTTTGATTATCCCTGTGATACATTATTGCCAGGAATGAAACTGGGATGGGACAAAGTGAAGGGTTTGAATAGGTTCCTTTCATCTTGGAGAAGTCCAGAGGATCCTGGTCAGGGAGAGCATGTCCTACAAATAGACCGTCGAGGGTTTCCACAATCTGTTCAATTGAAAGGAAGTGTTGTACAGTTTCGAGCAGGGTCATGGAATGGTCTCCATTTAACTGGATTTCCAGTTCAAAAGATAAATCCAATATACAAACCTGAATTTGTCTTCAATCAGAAAGAGGTGTATTATAAATATGAACTCATGGATGAATCTATTTTCTCAAGAATTATATTGAACCCTTCAGGCATTGGGCAGCGTTTTGTGTGGAGGGGTCAAAGACATGGGTGGGAGATTATCTCGGCTAACATGGATTTGTACCAAGGAATGCACAAGAATGGAATATGTCTTATTGGTCTGATGGCATATGCAGATTTGGACATTCGCAATGGAGGAAGTGGCTGCTTACTTTGGTTTCATGATCTAATTGACATGAAGCAACTCCATCATGGTGGACAAGACCTTTATGTACGAGTCTCTGCTTCTGAGATAGATCATGTGAAGGTTCACGGCTATGGGAATATCAACAAGAAAGAATTAGTAGGAATAACAGTTGGTTCATTCACATTAAACATGGGAATGGTATTGGTAATTTTTGGATTATGTGTATGGAAAAGGAAACTTCAAAAGCCAGGGATGACAAATATATATAACAAGAATAATTACTACAATAAACTGAAGAAGGAAGACTTGGATCTACAAATATTTGATTTGTCAGACATAGCAAAAGCCACTGACAATTTTTCAAGCAGCAACAAACTGGGAGAAGGTGGCTTTGGATCAGTATACAAGGGTATTTTGACAGATGGACAAGAGATAGCAGTGAAAAGGCTGTCTAACAATTCTGGTCAAGGTTTGGAGGAGTTAAAAAATGAAGTTGTGTTGATTGCCAAACTTCAGCACCGTAATCTTGTGAAGCTTCTTGGATGCTGCATTCAAGGAGAAGAGAAAATGTTAATCTATGAATACATGCTGAATAAAAGCTTAGACTACTTTATTTTTGATGAAACCAGAAGAAAGAATTTGAATTGGCATAAGCGATTCAATATCATTGATGGTATTGCTCGGGGACTTCTTTATCTTCATCAAGATTCAAGACTAAGGATTATTCACAGGGATTTGAAAACCAGCAACATTCTACTAGATGCATATTTAAATCCAAAAATATCAGACTTTGGCCTGGCACGCACATTTTGGGGAGATCACTTTGTAGCCCAAACAAACAGGATTGCTGGCACATATGGTTACATGCCTCCTGAGTATGCTATGCATGGACATTTCTCCATGAAATCCGATGTGTTCAGTTTTGGTGTAATAGTACTAGAGGTAGTTAGTGGGAGAAGGTCCTGTGGATTTTCAGACCCAGAACACTCCTTTAGTCTTCCAGGACATGCATGGACACTGTGGACTGAAAAGAGGCCCTTGCAACTAGTGGATGAAGTCCTAGAAGAAATTTCTTCTTCATCTGATGTCATAAGGTGTATACAGGTTGGCTTGTTATGTGTGCAACAAAGACCAGAAGATAGACCAGACATGTCATCAGTGGTTCTGATGTTGAACGGTGAGAAATCATTGCCTAAGCCAAAGGTTCCAGCTTTTTACAATGAAAGAGATGTATCTAAAGAAAATTCTCTGTCTGGAAAATTCAAAATGTTCTCCAATAATGATATTTCCCACGCTGTTTTAGAGGCAAGATAG 2265 0.3943 MDLMSETIQSSKLLSVCTLIFFTFIRACSSLDFIVPGQTVPDGYYLVSGGGTFELGFFSPGKSKSRYLGIWYKNISPLTVVWVANRETPLSDTRGVLKLNHHGVLLLVNSTNNTIWSSNFTSSRTAAEKPIAQLLNSGNLVVRDGNDSEGNFIWQSFDYPCDTLLPGMKLGWDKVKGLNRFLSSWRSPEDPGQGEHVLQIDRRGFPQSVQLKGSVVQFRAGSWNGLHLTGFPVQKINPIYKPEFVFNQKEVYYKYELMDESIFSRIILNPSGIGQRFVWRGQRHGWEIISANMDLYQGMHKNGICLIGLMAYADLDIRNGGSGCLLWFHDLIDMKQLHHGGQDLYVRVSASEIDHVKVHGYGNINKKELVGITVGSFTLNMGMVLVIFGLCVWKRKLQKPGMTNIYNKNNYYNKLKKEDLDLQIFDLSDIAKATDNFSSSNKLGEGGFGSVYKGILTDGQEIAVKRLSNNSGQGLEELKNEVVLIAKLQHRNLVKLLGCCIQGEEKMLIYEYMLNKSLDYFIFDETRRKNLNWHKRFNIIDGIARGLLYLHQDSRLRIIHRDLKTSNILLDAYLNPKISDFGLARTFWGDHFVAQTNRIAGTYGYMPPEYAMHGHFSMKSDVFSFGVIVLEVVSGRRSCGFSDPEHSFSLPGHAWTLWTEKRPLQLVDEVLEEISSSSDVIRCIQVGLLCVQQRPEDRPDMSSVVLMLNGEKSLPKPKVPAFYNERDVSKENSLSGKFKMFSNNDISHAVLEAR 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi649g00004 754 Gene3D Transferase(Phosphotransferase) domain 1 513 721 - -
Sebi649g00004 754 CDD B_lectin 38 160 IPR001480 -
Sebi649g00004 754 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 310 695 - -
Sebi649g00004 754 SMART blect_4 37 160 IPR001480 -
Sebi649g00004 754 PIRSF SRK 309 754 IPR024171 GO:0004674
Sebi649g00004 754 PIRSF SRK 4 310 IPR024171 GO:0004674
Sebi649g00004 754 Coils Coil 746 754 - -
Sebi649g00004 754 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 191 IPR036426 -
Sebi649g00004 754 Gene3D - 28 157 IPR036426 -
Sebi649g00004 754 ProSitePatterns Serine/Threonine protein kinases active-site signature. 558 570 IPR008271 GO:0004672|GO:0006468
Sebi649g00004 754 ProSitePatterns Protein kinases ATP-binding region signature. 443 465 IPR017441 GO:0005524
Sebi649g00004 754 ProSiteProfiles Bulb-type lectin domain profile. 31 155 IPR001480 -
Sebi649g00004 754 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 513 716 - -
Sebi649g00004 754 SMART serkin_6 437 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi649g00004 754 SUPERFAMILY Protein kinase-like (PK-like) 422 708 IPR011009 -
Sebi649g00004 754 Pfam Protein tyrosine and serine/threonine kinase 440 706 IPR001245 GO:0004672|GO:0006468
Sebi649g00004 754 Pfam D-mannose binding lectin 79 186 IPR001480 -
Sebi649g00004 754 ProSiteProfiles Protein kinase domain profile. 437 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi649g00004 754 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 402 512 - -
Sebi649g00004 754 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 26 157 - -
Sebi649g00004 754 Gene3D Phosphorylase Kinase; domain 1 400 512 - -
Sebi649g00004 754 CDD STKc_IRAK 443 710 - -
Sebi649g00004 754 Pfam S-locus glycoprotein domain 218 303 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi649g00004 Sebi-Chr649 65745 69118 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi649g00004 364 723 Receptor kinase-like Gene Family AT4G23190 50.549 8.57e-122 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sebi649g00004 PK_Tyr_Ser-Thr 7.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi649g00004 - - aprc:113865201 710.294