Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi649g00002 ATGACTCCAAGTCAATCCATCCGAGATGGTGAGAGTTTAGTTTCAGCCGGTGGAACTTTTGAAGTTGGATTCTTCAGCCCAGGGAACTCAAAAAGTCGATACTTGGGAATATGGTACAGAGTATCTCCTATGACAGTGGTATGGGTAGCCAACCGAGACAAACCACTCAATAATACCTCTGGAGTTCTAGAAGTCAACGATCAAGGAGTTCTTCTGCTCCAAAATGGTTCTGGCAGTAGCAGCAACAGCACTGTGTGGTCGTCCAATGTAACAAAGCAAGCAGACAATATTAATCCAATTGTACAACTATTGGACTCTGGAAATCTTCTTGTGAGAGAGGGAAGTGATATACTATGGCAGAGTTTTGATTATCCTTGTGATACTCTATTGCCAGGAATGGAGCTTGGATGGAATCTAGAGACTGGCCATGATAGGTTTCTATCATCTTGGAAAAATGGAGATGATCCTGATCTTGGAGACTATGTGTTTAAAATAGACTATAGAGGCTATCCACAAGCAGTTGAATTGAAGGGAACCGCCATAATGAACAGAGCAGGGCCATGGAATGGCCTAACCTTTTCAGCAAATCCAATTCAAACAAGAACTCCACAATATGATTCTGACTTTGTTGTGAATCAAAAGGAGATTTTTTTTAAGTCCCAACTCTTAGATAAATCTGCTTTATTCAGATATATATTGACCCCTTCAGGGAATAGGCAGATTTTCCATTGGAAAAGTGAAACAAGCAGCTGGGAGCTGATGTGGTCTCAACCATCAGTTCAATGTGACAATTATGCGTTGTGTGGTGCAAACTCTATTTGCAATTCTATCAACAACCCTCAGTGTGCTTGCCTCAAAGGGTTTGTAAGCAAATATCCAGCTGAATGGAATGTGTCAAATTGGTCTGATGGCTGTGTTCGGATCACTCCATTGAGTTGTGGCAAAGATGGGTTCAGGAAGTACACAGGCATGATTCTACCTGACACATCTTCTTCTTGGTTTAATAAGACCATGGTCCTGCAGGAATGTGAAGATTTATGCCTGCAAAACTGTTCCTGTACAGCATACGCGAATATGGATATAAGTGGTGGAGGAAGTGGCTGCTTGCTTTGGTTTCATGATCTGATTGACATGAGGCAATTCCCTCAAGCTCAAGGGGGACAGGACATTTATATACGATTCCCTCTTTCGGAGCTACAAGATCACTATCAGGACGAGTTAGGCAAGAAGCTTGCAAGCATCATCAGTGCCTGTACCGTGTTCATCGTGTGCATAATACTTGGACTGACCATATGTGTATGGAAAAAGAAACTTGCGAAGCCAGGGATGAGAAATCTATTTTATCAAATTCACCACAACTATAAATTAAGGAGACTAGAGGTAGATCCACCAGCATTTGACTTGCCTCTCATTGTTAAAGCCACTAATAACTTTTCGGGTACCAACAAACTTGGAGAAGGTGGTTTTGGATCAGTATACAAGGGTACACTAATGAATGGGCAAGACATAGCTGTGAAAAGGCTTTCAAAGAACTCTGATCAGGGGTTGGAGGAATTTAAAAATGAAGTTTCATTGATTGCCAAACTCCAGCACCGTAATCTTGTGAATCTTCTTGGTTATTGCATTCAAGGGGGAGAGAAAATTGGTTACATGCCTCCTGAATATGTTGTGCATGGACATTTCTCAATGAAATCCGATGTCTTTAGTTTCGGTGTGATTGTGTTAGAAATAATAAGTGGAAAGAAGATCAACGGATTTATTGACCATGAACACTTCGTTAATCTTGTTGGCCATGCATGGCGACTATGGACTGAAGGAAGGCCAATGAAACTAATAGATACATTTTTAGGAGAAAGATGCACTCCTTCTGAAGTCATTCGATGTATACATGTGGGTTTGTTATGTGTGCAACGAAAACCAGAAGATAGGCCTGATATGTCAGCTGTGGTTCTGATGTTAAATGGTGAGAAATTGTTGCCCCAACCAAAGGCACCTAGTTTTTACACAGGAAGGGATGTTGAAGCAGATTCTTTATCTGAAAAGTTAAAACTATTCACAAAAAATGATATTTCCCTTACAATTTTAGAGGCGAGATAG 2097 0.4087 MTPSQSIRDGESLVSAGGTFEVGFFSPGNSKSRYLGIWYRVSPMTVVWVANRDKPLNNTSGVLEVNDQGVLLLQNGSGSSSNSTVWSSNVTKQADNINPIVQLLDSGNLLVREGSDILWQSFDYPCDTLLPGMELGWNLETGHDRFLSSWKNGDDPDLGDYVFKIDYRGYPQAVELKGTAIMNRAGPWNGLTFSANPIQTRTPQYDSDFVVNQKEIFFKSQLLDKSALFRYILTPSGNRQIFHWKSETSSWELMWSQPSVQCDNYALCGANSICNSINNPQCACLKGFVSKYPAEWNVSNWSDGCVRITPLSCGKDGFRKYTGMILPDTSSSWFNKTMVLQECEDLCLQNCSCTAYANMDISGGGSGCLLWFHDLIDMRQFPQAQGGQDIYIRFPLSELQDHYQDELGKKLASIISACTVFIVCIILGLTICVWKKKLAKPGMRNLFYQIHHNYKLRRLEVDPPAFDLPLIVKATNNFSGTNKLGEGGFGSVYKGTLMNGQDIAVKRLSKNSDQGLEEFKNEVSLIAKLQHRNLVNLLGYCIQGGEKIGYMPPEYVVHGHFSMKSDVFSFGVIVLEIISGKKINGFIDHEHFVNLVGHAWRLWTEGRPMKLIDTFLGERCTPSEVIRCIHVGLLCVQRKPEDRPDMSAVVLMLNGEKLLPQPKAPSFYTGRDVEADSLSEKLKLFTKNDISLTILEAR 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi649g00002 698 ProSiteProfiles Protein kinase domain profile. 478 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi649g00002 698 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1 122 - -
Sebi649g00002 698 PIRSF SRK 1 548 IPR024171 GO:0004674
Sebi649g00002 698 PIRSF SRK 547 698 IPR024171 GO:0004674
Sebi649g00002 698 Gene3D - 1 122 IPR036426 -
Sebi649g00002 698 SUPERFAMILY alpha-D-mannose-specific plant lectins 46 156 IPR036426 -
Sebi649g00002 698 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 312 394 - -
Sebi649g00002 698 Gene3D Hepatocyte Growth Factor 311 393 - -
Sebi649g00002 698 Pfam PAN-like domain 313 378 IPR003609 -
Sebi649g00002 698 CDD B_lectin 4 125 IPR001480 -
Sebi649g00002 698 ProSitePatterns Protein kinases ATP-binding region signature. 484 506 IPR017441 GO:0005524
Sebi649g00002 698 SMART blect_4 4 125 IPR001480 -
Sebi649g00002 698 Pfam D-mannose binding lectin 45 151 IPR001480 -
Sebi649g00002 698 SUPERFAMILY Protein kinase-like (PK-like) 464 663 IPR011009 -
Sebi649g00002 698 ProSiteProfiles PAN/Apple domain profile. 313 395 IPR003609 -
Sebi649g00002 698 CDD PAN_AP_plant 309 395 - -
Sebi649g00002 698 ProSiteProfiles Bulb-type lectin domain profile. 1 124 IPR001480 -
Sebi649g00002 698 Pfam S-locus glycoprotein domain 184 291 IPR000858 GO:0048544
Sebi649g00002 698 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 443 551 - -
Sebi649g00002 698 Pfam Protein tyrosine and serine/threonine kinase 481 545 IPR001245 GO:0004672|GO:0006468
Sebi649g00002 698 Pfam Protein tyrosine and serine/threonine kinase 547 650 IPR001245 GO:0004672|GO:0006468
Sebi649g00002 698 SMART ntp_6 313 394 IPR003609 -
Sebi649g00002 698 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 2 643 - -
Sebi649g00002 698 Gene3D Phosphorylase Kinase; domain 1 444 546 - -
Sebi649g00002 698 Gene3D Transferase(Phosphotransferase) domain 1 547 657 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi649g00002 Sebi-Chr649 21617 25293 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi649g00002 454 698 Receptor kinase-like Gene Family AT4G23280 36.392 1.36e-43 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sebi649g00002 PK_Tyr_Ser-Thr 6.3e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi649g00002 - - gsj:114373347 691.804