Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi648g00001 ATGGTTCTCATAATCAACATTGCTAATGCTGGGAGTGGTTGTGGTGTCCTTGGGTTGGATGTTTCAATATGGAAATTGCTAAAAGATGCATTAACAATCAAATTGCAAAACCTTAATGTAGAGTCTAAGGTGAGACCTGTAGCAGCCCACAGCTTGAATCTTCAATTTGATTACTGCGGTCAAAGATATCTGCCATTCTCAATCATGGCAACTAGACTTCAATTTGAGAATTCTTGTGAAGTTGGAGTGTTCTCTAAACTTACCAATGCCTATTGTTTGGTTGCCATTGGAGGTTCTGAAAACTTCTACAGTGTATTTGAAGCTGAGTTCGCAGATGTTATCCCTGTGGTCAAGACATCCATTGGTGGCACTCGTATTATTGGTCGTCTTTGTGCTGGAAACAAGAATGGGCTCCTCTTGCCCCATACCACCACAGACCAAGAGCTTCAACATTTGAGAAACAGTCTACCTGATCACGTTGTTGTTCAGCGGATAGAAGAAAGATTGTCTGCTCTAGGAAATTGTATAGCATGTAATGACCATGTGGCCCTCACTCACACTGATCTTGACAGGGAGACTGAGGAGATGATTGCAGATGTTCTTGGAGTAGAAGTTTTCAGGCAGACGATTGCTGGTAATATTCTTGTTGGTAGTTACTGTGCCTTCTCCAATAGAGGTGGTTTGGTCCACCCTCATACTTCCATAGAAGACTTGGATGAACTTTCTACACTTCTTCAGGTTCCTTTGGTGGCTGGGACGGTGAACCGGGGAAGTGAAGTAATAGCTGCTGGAATGACAGTTAATGATTGGACAGCATTTTGTGGTTCAGACACCACTGCAACAGAGCTCTCTGTTATTGAGAGTGTTTTCAAGCTGAGGGAAGCACAACCTAGTGCCATTGTGGACGAGATGAGGAAATCGCTTATTGACAGCTATGTCTGA 942 0.4321 MVLIINIANAGSGCGVLGLDVSIWKLLKDALTIKLQNLNVESKVRPVAAHSLNLQFDYCGQRYLPFSIMATRLQFENSCEVGVFSKLTNAYCLVAIGGSENFYSVFEAEFADVIPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDHVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGMTVNDWTAFCGSDTTATELSVIESVFKLREAQPSAIVDEMRKSLIDSYV 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi648g00001 313 Gene3D - 69 293 - -
Sebi648g00001 313 Pfam eIF-6 family 72 271 IPR002769 GO:0042256|GO:0043022
Sebi648g00001 313 FunFam Eukaryotic translation initiation factor 6 69 293 - -
Sebi648g00001 313 SMART eIF6neu2 71 272 IPR002769 GO:0042256|GO:0043022
Sebi648g00001 313 CDD IF6 70 291 IPR002769 GO:0042256|GO:0043022
Sebi648g00001 313 Hamap Translation initiation factor 6 [eif6]. 57 313 IPR002769 GO:0042256|GO:0043022
Sebi648g00001 313 SUPERFAMILY Pentein 69 292 - -
Sebi648g00001 313 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 69 312 IPR002769 GO:0042256|GO:0043022
Sebi648g00001 313 Coils Coil 305 313 - -
Sebi648g00001 313 NCBIfam translation initiation factor IF-6 72 292 IPR002769 GO:0042256|GO:0043022
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi648g00001 Sebi-Chr648 14179 17614 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi648g00001 69 313 Eukaryotic Initiation Factors Gene Family AT3G55620 91.020 4.34e-171 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi648g00001 K03264 - ming:122066887 473.781