Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi647g00014 ATGACCACGCAACAACTGATCACCCTGGTGTTAATGATTGCAATATTAGTAACTGTGGAAGGAGCAGCAGCACTTGATAATAACGCCCTACCTGGTTGCATAGACACATGTGGTAATGTTTCAATTCCATATCCATTTGGCGTAGGCAAATCTTCTAAAACAGGTGATGTGAACTGTTTCTTGGAAGAAAGGTTGAACCTTACCTGCAATAATAACACTTTATATCACGGGAATGTCCAAGTTTTAAACATAAGCCTCAAAGGCCAATTGGACATGATGTTTTATGTCTCAATGCTTTGCAATGATACCAAAAATGGAGTGGCTAATGAGCCCTATCTACGCACTCCTGCTTTCACCATTTCTAACAAAGACAACAAGTTCGTAAGTGTTGGCTGCGACACCTACGGCTATCTCAATAGCTTTCGCGACGGGGAAGAGTATTCAACCGGATGCATAACAAGATGTAGCAAGTTACCTAATACGGTAATCGATGGACAGTGTTCGGGAATAGGGTGTTGCCAGGTGGATATTCCTTCTGAAATGAAGAATATCACTTTACAAACCTACAGGTTTAACTCTATGAACTTCACCGGCTGTAGCTATTCCTTTGTTGCCAAACAAGGCTCCTATAACTTTTCCGTCAGTCATTTAAAGAACCACCTGCCTTTCGCCCAGCTTCCTATGGTTGTTGATTGGACGGTTGGAGACGAGTCATGTGAATTTTTCCAGAAGAATAATGGACAGAAAAGTGCCTGCATGAATAATAGCTATTGTGACGACGGTGACACTAGTTATGGATACCGGTGTACATGTAAATCTGGTTATGATGGAAACCCATACCATCCCAATGGTTGCCAAGGTGCATGTGCTGGACTTATAGCTCTATTGGGTACTTCCTGGTTATACTTAATCTATCAAAAAAGGAAACTCACAAAACAAAGAGAGAAATTCTTTCAACAAAATGGTGGTTTCATTTTGCAACGAAGACTCTCTTCAAGAGAAGACTCCCATCAAATTGCTCAAATTTTCACAGCTGAAGAGCTGAAAAAGGCGACCAACAACTACAATGAGAGCTTAATCATTGGAAAAGGAGGTTTTGGTACAGTTTTCAAAGGATTTCTTGCTAATAATAGGATTGTTGCTGTGAAGAAGTCCAAGGTAGTGGATCAAAACCAAGCTGAGCAATTCATCAACGAAGTGATTATTCTATCCCAAATCAATCACAGGAACGTGGTAAAACTCTTGGGTTGTTGTTTAGACACTGAAGTCCCATTATTGGTTTATGAATTTGTTAACAATAGTACCCTTTATGATCACTTACACAATGAAAGCAAGATAGGTAATCTCACTTGGAAGACCCGTCTAAGAATAGCTATAGAGACAGCTGGAGCATTATCATATTTGCATTCAGATGCTTCAATAACCATTATCCATAGGGATGTGAAGAGTTCCAACATTCTTTTGGATGACAATTATACTGCTAAAGTGTCTGATTTTGGAGCTTCAAAGTTGGTTCCACTTGATCAAGCTGAATTAGCCACAATGGTACAAGGGACATTCGGTTACTTGGACCCTGAGTACATGCAAACAAGTAGGCTCACTGAGAAGAGTGATGTTTATAGCTTTGGAGTAGTGCTTGTAGAACTTTTAACAGGGCAGAAAGCAGTTTCATTTCAGAGGCCAGAAGAAGAAAGAAGTCTTGCCCTGCATTTTCTGTCTTACTTGGAAGATGGTAGATTGTTTGAAATTCTTGATTTTGGTCTTTTGAATGAAGAAAATAGGGAGGAGATTCAGGAAGTTGCTATTCTTGCAAGCAAGTGCATGAGACTTAAAGGGGAGGAGAGGCCTAGCATGAAGCAAGTGGAAATTGAGCTGAAGGGAATAAGGAAAACAGAGAAGCACCCATGGACCAATATAGACCTGAATTTGGAGGAGTCTCAATACTTACTTCCTGAGGTATCTGGCATTTATAGGCATGGTGATAGCAGCAACTATGGAAATACTGAGTATGATAGTTTGAGGGACCATGTACAAGTTTCCTTTGATATTGCACGTTAA 2058 0.4018 MTTQQLITLVLMIAILVTVEGAAALDNNALPGCIDTCGNVSIPYPFGVGKSSKTGDVNCFLEERLNLTCNNNTLYHGNVQVLNISLKGQLDMMFYVSMLCNDTKNGVANEPYLRTPAFTISNKDNKFVSVGCDTYGYLNSFRDGEEYSTGCITRCSKLPNTVIDGQCSGIGCCQVDIPSEMKNITLQTYRFNSMNFTGCSYSFVAKQGSYNFSVSHLKNHLPFAQLPMVVDWTVGDESCEFFQKNNGQKSACMNNSYCDDGDTSYGYRCTCKSGYDGNPYHPNGCQGACAGLIALLGTSWLYLIYQKRKLTKQREKFFQQNGGFILQRRLSSREDSHQIAQIFTAEELKKATNNYNESLIIGKGGFGTVFKGFLANNRIVAVKKSKVVDQNQAEQFINEVIILSQINHRNVVKLLGCCLDTEVPLLVYEFVNNSTLYDHLHNESKIGNLTWKTRLRIAIETAGALSYLHSDASITIIHRDVKSSNILLDDNYTAKVSDFGASKLVPLDQAELATMVQGTFGYLDPEYMQTSRLTEKSDVYSFGVVLVELLTGQKAVSFQRPEEERSLALHFLSYLEDGRLFEILDFGLLNEENREEIQEVAILASKCMRLKGEERPSMKQVEIELKGIRKTEKHPWTNIDLNLEESQYLLPEVSGIYRHGDSSNYGNTEYDSLRDHVQVSFDIAR 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi647g00014 685 ProSiteProfiles EGF-like domain profile. 243 286 IPR000742 -
Sebi647g00014 685 ProSitePatterns Protein kinases ATP-binding region signature. 361 384 IPR017441 GO:0005524
Sebi647g00014 685 FunFam Wall-associated receptor kinase 2 325 430 - -
Sebi647g00014 685 SUPERFAMILY Protein kinase-like (PK-like) 336 622 IPR011009 -
Sebi647g00014 685 ProSiteProfiles Protein kinase domain profile. 355 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi647g00014 685 Gene3D Transferase(Phosphotransferase) domain 1 431 647 - -
Sebi647g00014 685 SMART serkin_6 355 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi647g00014 685 Gene3D Phosphorylase Kinase; domain 1 323 430 - -
Sebi647g00014 685 Pfam Protein kinase domain 356 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi647g00014 685 CDD STKc_IRAK 361 628 - -
Sebi647g00014 685 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Sebi647g00014 685 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 26 632 IPR045274 GO:0007166
Sebi647g00014 685 Pfam Wall-associated receptor kinase galacturonan-binding 33 89 IPR025287 GO:0030247
Sebi647g00014 685 FunFam Wall-associated receptor kinase 2 431 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi647g00014 Sebi-Chr647 377515 381667 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi647g00014 10 685 Receptor kinase-like Gene Family AT1G21230 42.570 2.32e-179 526
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Sebi647g00014 Pkinase 1.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi647g00014 - - gmx:100819535 807.749